Parental gene:

VTI1B, ENSGGOG00000005620

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:14:48758804..48782396(-)


>ENSGGOG00000005620
ATGGCCTCCTCCGCCGCCTCCTCGGAGCATTTCGAGAAGCTGCACGAGATCTTCCGCGGCCTCCATGAAGACCTACAAGG
GGTGCCCGAGCGGCTGCTGGGGACGGCGGGGACCGAAAAAAAAAAAAAAACCATTCTCCTGTTTCAGAAAGAGGAGCAGG
AGAAGCCTTCCCAGCTGGCAGAGATGGAGGAGGAGCTACGTTATGCACCCCTGTCTTTCCGAAACCCCATGATGTCTAAG
CTTCGAAAGTACCGGAAGGACCTTGCTAAACTCCATCGGGAGGTGAGAAGCACACCTTTGACAGCCACACCTGGAGGCCG
AGGAGACATGAAATATGGCATATATGCTGTAGAGAATGAGCATATGAATCGGCTACAGTCTCAAAGGGCAGTGCTTCTGC
AAGGCACTGAAAGCCTGAACCGGGCCACCCAAAGTATTGAACGTTCTCATCGGATTGCCACAGAGACTGACCAGATTGGC
TCAGAAATCATAGAAGAGCTGGGGGAACAACGAGACCAGTTAGAACGTACCAAGAGTAGACTGGTAAATACAAGTGAAAA
CTTGAGCAAAAGTCGGAAGATTCTCCGTTCAATGTCCAGAAAAGTGACAACCAACAAGCTGCTGCTTTCCATTATCATCT
TACTGGAGCTCGCCATCCTGGGAGGCCTGGTTTACTACAAATTCTTTCGCAGCCATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 45 .12 RPM
SRP007412_cerebellum 21 .51 RPM
SRP007412_heart 14 .13 RPM
SRP007412_kidney 53 .16 RPM
SRP007412_liver 16 .06 RPM
SRP007412_testis 39 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015263 ortholog_one2one 1 retrogene
Dasypus novemcinctus ENSDNOG00000003643 ortholog_one2one 2 retrogenes
Dipodomys ordii ENSDORG00000015939 ortholog_one2one 2 retrogenes
Echinops telfairi ENSETEG00000006101 ortholog_one2many 1 retrogene
Felis catus ENSFCAG00000014090 ortholog_one2one 1 retrogene
Homo sapiens ENSG00000100568 ortholog_one2one 3 retrogenes
Macropus eugenii ENSMEUG00000004910 ortholog_one2one 2 retrogenes
Microcebus murinus ENSMICG00000010843 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000011184 ortholog_one2many 3 retrogenes
Macaca mulatta ENSMMUG00000015866 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000007130 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000000780 ortholog_one2many 4 retrogenes
Pongo abelii ENSPPYG00000005927 ortholog_one2one 5 retrogenes
Pan troglodytes ENSPTRG00000006468 ortholog_one2one 3 retrogenes
Pteropus vampyrus ENSPVAG00000011671 ortholog_one2one 3 retrogenes
Tupaia belangeri ENSTBEG00000003049 ortholog_one2one 1 retrogene
Tarsius syrichta ENSTSYG00000007688 ortholog_one2one 2 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_797 64.44 57.33
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ggor_1871 85.47 100.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSGGOG00000005620 retrocopies