Parental gene: | PTCD2, ENSGGOG00000010695 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 17:25471644..25510607(-) |
>ENSGGOG00000010695
ATGGTCCGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAATCGAGTTCTCCTGCAGGCGCTGCAGATTTTGGTGTATCC
TGGGGTGGGAGGCTCCGGCTCTGTCAGTTGCCGCTGCCCTCTCGGAGCTAAAAGATACCTACTTACAGATAATGTGGTGA
AATTAAAAGAATTTCAACAAAAGAAAGTGGCTGTTGCATGTAATCTTTCTGGCACTAAAGAAACGTATTTTAGAAACTTG
AAAAAGAAACTGACCCAGAACAAGCTCATCTTGAAGGGGGAGTTGATAACCTTACTACATTTGTGTGAGTCCCGGGACCA
TGTGGAACTGGCTAAAAATGTCATTTACAGGTACCATGCAGAGAACAAAAATTTCACTTTGGGGGAGTATAAATTTGGAC
CGCTTTTTGTGAGGTTGTGTTACGAGTTGGATCTCGAGGAATCTGCAGTGGAGCTCATGAAAGACCAGCATTTACGAGGT
TTCTTCTCAGACTCCACATCATTCAATATTTTGATGGATATGTTATTTATCAAAGGCAAATATAAAAGTGCTTTGCAAGT
ATTGATAGAGATGAAAAACCAAGATGTGAAGTTCACCAAAGATACCTATGTTCTTGCTTTTGCAATTTGCTACAAACTGA
ATAGCCCTGAGTCTTTCAAAATCTGTACTACATTAAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCTCCAGGAGAGCA
TCCTGTTTCGCTGTGGCATTAGCTTTGAATCAGAATGAGATGGCAAAAGCTATGTCCATTTTTTCTCAAATCATGAATCC
AGAAAGCATAGCCTGCATTAATTTAAATATTATAATCCATATCCAGTCAAATATGTTGGAAAACCTGATAAAGACTCTAA
AAAATGCTGCAGAAGGAAATTTATCAAAATTTGTGAAAAGACATGTGTTCTCGGAGGAAGTGCTGGCCAAAGTGAGGGAA
AAAGTGAAGGATGTGCCTGCCCTTGTGGCCAAATTTGATGAGATCTATGGGACACTGCACATCACTGGCCAGGTCACCAC
TGATTCTTTGGATGCTGTGCTCTGCCACACCCCCAGGGACAGGAAATCCCACACGTTGCTATTAAACAAGAGGATGGTCA
GCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTGTTGGCTGAGTAA
ATGGTCCGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAATCGAGTTCTCCTGCAGGCGCTGCAGATTTTGGTGTATCC
TGGGGTGGGAGGCTCCGGCTCTGTCAGTTGCCGCTGCCCTCTCGGAGCTAAAAGATACCTACTTACAGATAATGTGGTGA
AATTAAAAGAATTTCAACAAAAGAAAGTGGCTGTTGCATGTAATCTTTCTGGCACTAAAGAAACGTATTTTAGAAACTTG
AAAAAGAAACTGACCCAGAACAAGCTCATCTTGAAGGGGGAGTTGATAACCTTACTACATTTGTGTGAGTCCCGGGACCA
TGTGGAACTGGCTAAAAATGTCATTTACAGGTACCATGCAGAGAACAAAAATTTCACTTTGGGGGAGTATAAATTTGGAC
CGCTTTTTGTGAGGTTGTGTTACGAGTTGGATCTCGAGGAATCTGCAGTGGAGCTCATGAAAGACCAGCATTTACGAGGT
TTCTTCTCAGACTCCACATCATTCAATATTTTGATGGATATGTTATTTATCAAAGGCAAATATAAAAGTGCTTTGCAAGT
ATTGATAGAGATGAAAAACCAAGATGTGAAGTTCACCAAAGATACCTATGTTCTTGCTTTTGCAATTTGCTACAAACTGA
ATAGCCCTGAGTCTTTCAAAATCTGTACTACATTAAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCTCCAGGAGAGCA
TCCTGTTTCGCTGTGGCATTAGCTTTGAATCAGAATGAGATGGCAAAAGCTATGTCCATTTTTTCTCAAATCATGAATCC
AGAAAGCATAGCCTGCATTAATTTAAATATTATAATCCATATCCAGTCAAATATGTTGGAAAACCTGATAAAGACTCTAA
AAAATGCTGCAGAAGGAAATTTATCAAAATTTGTGAAAAGACATGTGTTCTCGGAGGAAGTGCTGGCCAAAGTGAGGGAA
AAAGTGAAGGATGTGCCTGCCCTTGTGGCCAAATTTGATGAGATCTATGGGACACTGCACATCACTGGCCAGGTCACCAC
TGATTCTTTGGATGCTGTGCTCTGCCACACCCCCAGGGACAGGAAATCCCACACGTTGCTATTAAACAAGAGGATGGTCA
GCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTGTTGGCTGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 12 .66 RPM |
| SRP007412_cerebellum | 8 .04 RPM |
| SRP007412_heart | 4 .75 RPM |
| SRP007412_kidney | 11 .74 RPM |
| SRP007412_liver | 7 .17 RPM |
| SRP007412_testis | 14 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016364 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000049883 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000017908 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004516 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008390 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016968 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000006596 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_534 | 70.90 | 62.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1077 | 77.59 | 61.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000010695 retrocopies