Parental gene:

PTCD2, ENSGGOG00000010695

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:17:25471644..25510607(-)


>ENSGGOG00000010695
ATGGTCCGAGACAGTATGGCTGCTGCATTTCGGCCCTCGAATCGAGTTCTCCTGCAGGCGCTGCAGATTTTGGTGTATCC
TGGGGTGGGAGGCTCCGGCTCTGTCAGTTGCCGCTGCCCTCTCGGAGCTAAAAGATACCTACTTACAGATAATGTGGTGA
AATTAAAAGAATTTCAACAAAAGAAAGTGGCTGTTGCATGTAATCTTTCTGGCACTAAAGAAACGTATTTTAGAAACTTG
AAAAAGAAACTGACCCAGAACAAGCTCATCTTGAAGGGGGAGTTGATAACCTTACTACATTTGTGTGAGTCCCGGGACCA
TGTGGAACTGGCTAAAAATGTCATTTACAGGTACCATGCAGAGAACAAAAATTTCACTTTGGGGGAGTATAAATTTGGAC
CGCTTTTTGTGAGGTTGTGTTACGAGTTGGATCTCGAGGAATCTGCAGTGGAGCTCATGAAAGACCAGCATTTACGAGGT
TTCTTCTCAGACTCCACATCATTCAATATTTTGATGGATATGTTATTTATCAAAGGCAAATATAAAAGTGCTTTGCAAGT
ATTGATAGAGATGAAAAACCAAGATGTGAAGTTCACCAAAGATACCTATGTTCTTGCTTTTGCAATTTGCTACAAACTGA
ATAGCCCTGAGTCTTTCAAAATCTGTACTACATTAAGAGAAGAAGCTCTACTCAAAGGAGAAATTCTCTCCAGGAGAGCA
TCCTGTTTCGCTGTGGCATTAGCTTTGAATCAGAATGAGATGGCAAAAGCTATGTCCATTTTTTCTCAAATCATGAATCC
AGAAAGCATAGCCTGCATTAATTTAAATATTATAATCCATATCCAGTCAAATATGTTGGAAAACCTGATAAAGACTCTAA
AAAATGCTGCAGAAGGAAATTTATCAAAATTTGTGAAAAGACATGTGTTCTCGGAGGAAGTGCTGGCCAAAGTGAGGGAA
AAAGTGAAGGATGTGCCTGCCCTTGTGGCCAAATTTGATGAGATCTATGGGACACTGCACATCACTGGCCAGGTCACCAC
TGATTCTTTGGATGCTGTGCTCTGCCACACCCCCAGGGACAGGAAATCCCACACGTTGCTATTAAACAAGAGGATGGTCA
GCCGTCGCACCTTCCAGCCACTCAGCCAGTCCCTGTTGGCTGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .66 RPM
SRP007412_cerebellum 8 .04 RPM
SRP007412_heart 4 .75 RPM
SRP007412_kidney 11 .74 RPM
SRP007412_liver 7 .17 RPM
SRP007412_testis 14 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016364 ortholog_one2one 1 retrogene
retro_cjac_1598,
Homo sapiens ENSG00000049883 ortholog_one2one 2 retrogenes
retro_hsap_1388, retro_hsap_607,
Macaca mulatta ENSMMUG00000017908 ortholog_one2one 1 retrogene
retro_mmul_2240,
Nomascus leucogenys ENSNLEG00000004516 ortholog_one2one 2 retrogenes
retro_nleu_2954, retro_nleu_436,
Otolemur garnettii ENSOGAG00000008390 ortholog_one2one 1 retrogene
retro_ogar_3169,
Pan troglodytes ENSPTRG00000016968 ortholog_one2one 2 retrogenes
retro_ptro_447, retro_ptro_952,
Ictidomys tridecemlineatus ENSSTOG00000006596 ortholog_one2one 1 retrogene
retro_itri_1469,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_534 70.90 62.63
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2. retro_ggor_1077 77.59 61.08
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Download FASTA sequences of all ENSGGOG00000010695 retrocopies