Parental gene:

ENSMLUG00000003117

Aliases:None
Description:Histone deacetylase [Source:UniProtKB/TrEMBL;Acc:G1NZE8]
Organism:Microbat (Myotis lucifugus)
Coordinates:GL429778:2577063..2605992(-)


>ENSMLUG00000003117
CGGAGCCGGGGCGGCGGCGGCGGCGGCAGCAGCAGGAGGAGGAGCCCGGAGGCGGCGGCGGCCGGGGAGCCCATGGCGTA
CAGTCAGGGAGGCGGCAAAAAGAAAGTCTGCTACTACTACGATGGTGATATTGGAAACTATTACTATGGACAAGGCCATC
CTATGAAACCTCATAGAATCCGCATGACCCATAACTTGCTGCTAAATTATGGCTTATATAGAAAAATGGAAATATATAGG
CCCCATAAAGCCACTGCTGAAGAAATGACAAAATACCACAGTGATGAATACATCAAATTTCTACGTTCAATAAGACCAGA
TAACATGTCTGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGAGAAGATTGTCCAGTGTTTGATGGACTCTTTGAGT
TTTGTCAGCTCTCAACTGGTGGCTCAGTTGCTGGAGCTGTGAAGTTAAACCGACAACAAACTGATATGGCTGTTAATTGG
GCTGGAGGATTACATCATGCTAAGAAATCAGAAGCATCAGGATTCTGTTATGTTAATGATATTGTGCTTGCCATCCTTGA
ATTACTAAAGTATCACCAGAGAGTCTTATATATTGATATTGATATCCATCACGGTGATGGTGTTGAAGAAGCTTTTTATA
CAACAGATCGTGTAATGACTGTATCATTCCATAAATACGGGGAATACTTTCCTGGAACAGGAGACTTAAGGGATATTGGT
GCAGGAAAAGGCAAATACTATGCTGTCAATTTTCCAATGAGAGATGGTATAGATGATGAATCTTATGGGCAAATATTTAA
GCCTATCATCTCAAAAGTGATGGAGATGTATCAGCCTAGTGCTGTGGTGCTACAGTGTGGTGCAGACTCGCTGTCTGGTG
ATAGACTTGGTTGCTTCAATCTGACAGTCAAAGGTCATGCTAAATGTGTAGAAGTTGTAAAAACTTTCAATTTACCATTA
CTGATGCTTGGGGGAGGTGGATACACAATTCGTAACGTTGCTCGCTGTTGGACATATGAGACTGCAGTTGCCCTTGATTG
TGAGATTCCTAATGAATTGCCATATAATGATTACTTTGAGTATTTTGGACCAGACTTCAAACTGCATATTAGTCCTTCAA
ATATGACAAACCAGAACACTCCAGAATATATGGAAAAGATAAAACAGCGTTTATTTGAAAATTTACGCATGTTGCCTCAT
GCACCTGGTGTCCAAATGCAAGCTATTCCAGAAGATGCTGTCCATGAAGACAGTGGAGATGAAGATGGAGAAGACCCAGA
CAAGAGAATTTCTATTCGAGCATCAGACAAACGGATAGCTTGTGATGAAGAATTCTCAGATTCAGAGGATGAAGGAGAAG
GAGGTCGTAGAAATGTGGCTGATCATAAGAAAGGAGCAAAGAAAGCTAGAATTGAGGAAGACAAGAAGGAAACAGAAGAC
AAAAAAGCTGATGTTAAGGAAGAAGATAAATCCAAGGATAATAGTGGTGAAAAAACAGATACCAAAGGAGCCAAATCAGA
ACAGCTCAGCAACCCTTGA

Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000002649 ortholog_one2many 1 retrogene
retro_cint_18,
Echinops telfairi ENSETEG00000008468 ortholog_many2many 1 retrogene
retro_etel_488,
Myotis lucifugus ENSMLUG00000008662 within_species_paralog 1 retrogene
retro_mluc_642,
Myotis lucifugus ENSMLUG00000013837 within_species_paralog 1 retrogene
retro_mluc_283,
Monodelphis domestica ENSMODG00000017860 ortholog_one2many 1 retrogene
retro_mdom_597,
Ornithorhynchus anatinus ENSOANG00000003631 ortholog_one2many 1 retrogene
retro_oana_79,
Pan troglodytes ENSPTRG00000018519 ortholog_one2many 1 retrogene
retro_ptro_69,
Sorex araneus ENSSARG00000000354 ortholog_one2many 1 retrogene
retro_sara_651,
Ictidomys tridecemlineatus ENSSTOG00000012779 ortholog_one2many 1 retrogene
retro_itri_374,
Tarsius syrichta ENSTSYG00000009363 ortholog_one2many 4 retrogenes
retro_tsyr_1337, retro_tsyr_1355, retro_tsyr_681, retro_tsyr_765,
Tursiops truncatus ENSTTRG00000015043 ortholog_one2many 1 retrogene
retro_ttru_462,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_225 96.72 95.31
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2. retro_mluc_935 93.26 72.27
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3. retro_mluc_1570 97.06 99.61
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4. retro_mluc_2548 97.88 73.83
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Download FASTA sequences of all ENSMLUG00000003117 retrocopies