Parental gene: | HDAC2, ENSTSYG00000009363 |
| Aliases: | None |
| Description: | histone deacetylase 2 [Source:HGNC Symbol;Acc:4853] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | scaffold_13866:5310..25937(-) |
>ENSTSYG00000009363
GATATTGGAAATTACTATTATGGACAAGGTCATCCCATGAAACCTCATAGAATCCGCATGACCCATAACCTGCTGCTAAA
TTATGGCNNNNNNNNNNNNNNNNNNNNNNNNAGGCCCCACAAAGCCACTGCCGAAGAAATGACAAAGTACCACAGTGATG
AGTATATCAAATTTCTGCGGTCCATAAGGCCAGATAACATGTCTGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGA
GAAGACTGTCCAGTGTTTGATGGACTCTTTGAGTTCTGTCAGCTCTCTACTGGTGGCTCAGTTGCTGGGGCTGTGAAGTT
AAACCGACAGCAAACTGACATGGCTGTTAACTGGGCTGGAGGATTACATCATGCAAAGAAGTCAGAAGCCTCAGGATTCT
GTTATGTTAATGATATTGTGCTTGCCATTCTTGAATTACTAAAGTATCATCAGAGAGTCTTGTATATTGATATAGACATC
CATCATGGCGATGGTGTAGAAGAAGCCTTTTATACGACAGATCGGGTAATGACTGTATCATTCCATAAGTACGGGGAATA
CTTTCCTGGCACAGGAGACTTGAGGGATATTGGTGCTGGAAAAGGCAAATACTATGCTGTTAATTTTCCCATGAGAGATG
GTATTGATGATGAATCATATGGACAGATATTTAAGCCTATTATCTCCAAGGTGATGGAGATGTACCAGCCCAGTGCTGTG
GTCTTACAGTGTGGGGCAGACTCACTCTCTGGTGACAGACTCGGTTGTTTCAATCTCACAGTCAAAGGTCATGCTAAATG
TGTAGAAGTTGTAAAAACTTTTAACTTGCCATTGCTGATGCTTGGGGGAGGTGGATACACAATCCGCAATGTGGCTCGGT
GTTGGACTTATGAGACTGCCGTTGCCCTTGACTGTGAGATTCCCAATGAGTTGCCATATAATGATTACTTCGAATATTTT
GGACCGGACTTCAAACTGCATATTAGTCCTTCAAACATGACAAACCAGAACACTCCAGAATACATGGAAAAGATAAAGCA
GCGATTATTTGAAAATTTGCGCATGTTACCTCATGCACCTGGTGTCCAAATGCAAGCTATTCCAGAAGATGCTGTTCACG
AAGACAGTGGGGATGAAGATGGAGAAGATCCAGACAAGAGGATTTCTATTCGAGCATCCGACAAGCGGATAGCCTGTGAT
GAAGAGTTCTCGGATTCTGAAGATGAAGGAGAAGGAGGCCGTAGGAATGTGACTGACCATAAGAAAGGTGCCAAGAAAGC
CAGACTGGAGGAAGATAAGAAGGAGGCAGAGGACAAAAAAGCAGATGTTAAGGAAGAAGAGAAATCCAAGGACAATAGTG
GTGAAAAAACAGATACCAAAGGAGCTAAATCAGAACAGCTCAGCAATCCTTGA
GATATTGGAAATTACTATTATGGACAAGGTCATCCCATGAAACCTCATAGAATCCGCATGACCCATAACCTGCTGCTAAA
TTATGGCNNNNNNNNNNNNNNNNNNNNNNNNAGGCCCCACAAAGCCACTGCCGAAGAAATGACAAAGTACCACAGTGATG
AGTATATCAAATTTCTGCGGTCCATAAGGCCAGATAACATGTCTGAGTATAGTAAGCAGATGCAGAGATTTAATGTTGGA
GAAGACTGTCCAGTGTTTGATGGACTCTTTGAGTTCTGTCAGCTCTCTACTGGTGGCTCAGTTGCTGGGGCTGTGAAGTT
AAACCGACAGCAAACTGACATGGCTGTTAACTGGGCTGGAGGATTACATCATGCAAAGAAGTCAGAAGCCTCAGGATTCT
GTTATGTTAATGATATTGTGCTTGCCATTCTTGAATTACTAAAGTATCATCAGAGAGTCTTGTATATTGATATAGACATC
CATCATGGCGATGGTGTAGAAGAAGCCTTTTATACGACAGATCGGGTAATGACTGTATCATTCCATAAGTACGGGGAATA
CTTTCCTGGCACAGGAGACTTGAGGGATATTGGTGCTGGAAAAGGCAAATACTATGCTGTTAATTTTCCCATGAGAGATG
GTATTGATGATGAATCATATGGACAGATATTTAAGCCTATTATCTCCAAGGTGATGGAGATGTACCAGCCCAGTGCTGTG
GTCTTACAGTGTGGGGCAGACTCACTCTCTGGTGACAGACTCGGTTGTTTCAATCTCACAGTCAAAGGTCATGCTAAATG
TGTAGAAGTTGTAAAAACTTTTAACTTGCCATTGCTGATGCTTGGGGGAGGTGGATACACAATCCGCAATGTGGCTCGGT
GTTGGACTTATGAGACTGCCGTTGCCCTTGACTGTGAGATTCCCAATGAGTTGCCATATAATGATTACTTCGAATATTTT
GGACCGGACTTCAAACTGCATATTAGTCCTTCAAACATGACAAACCAGAACACTCCAGAATACATGGAAAAGATAAAGCA
GCGATTATTTGAAAATTTGCGCATGTTACCTCATGCACCTGGTGTCCAAATGCAAGCTATTCCAGAAGATGCTGTTCACG
AAGACAGTGGGGATGAAGATGGAGAAGATCCAGACAAGAGGATTTCTATTCGAGCATCCGACAAGCGGATAGCCTGTGAT
GAAGAGTTCTCGGATTCTGAAGATGAAGGAGAAGGAGGCCGTAGGAATGTGACTGACCATAAGAAAGGTGCCAAGAAAGC
CAGACTGGAGGAAGATAAGAAGGAGGCAGAGGACAAAAAAGCAGATGTTAAGGAAGAAGAGAAATCCAAGGACAATAGTG
GTGAAAAAACAGATACCAAAGGAGCTAAATCAGAACAGCTCAGCAATCCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona intestinalis | ENSCING00000002649 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008468 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000003117 | ortholog_one2many | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000017860 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000003631 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018519 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000000354 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000012779 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015043 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_681 | 73.01 | 61.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_765 | 81.78 | 57.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_1337 | 81.78 | 57.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_1355 | 72.98 | 75.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000009363 retrocopies