Parental gene:

HDAC2, ENSTTRG00000015043

Aliases:None
Description:histone deacetylase 2 [Source:HGNC Symbol;Acc:4853]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_2068:169191..200084(-)


>ENSTTRG00000015043
ACGCGCCCACCTCCCCTCGGCCTCCGGAGGTGGTTTGGCTGCCTCCTCCCCCTCCCCAGTGTCGCGAGTTGGCGCCGCTG
CCACCCCCCGGTCCGCGCTCTCGGCCACTCGGCCGGGCGGTACCGAGCCCTCCCGGCACCCCCTCCTCTCTTCCCTCCGG
CCTGCCTTTCCCCGCGGCACTGCCACCCCCACCTTCGCCCCAGCCCTCTTCTCTCCCCGCCGAGCCGCGGCGGCAGCAGC
AGCAGAAGCAGCCAGAGGAGGCCGGAGGCGGCGGTGGCCGGGGAGCCCATGGCGTACAGTCAGGGAGGCGGCAAGAAGAA
AGTCTGCTACTACTACGATGGTGATATTGGAAATTATTATTACGGACAGGGTCATCCCATGAAACCTCATAGGATCCGCA
TGACCCATAACTTGCTGCTAAATTATGGCTTGTATAGAAAAATGGAAATATATAGGCCCCATAAAGCCACTGCTGAAGAA
ATGACAAAATACCACAGCGATGAGTACATCAAATTTCTACGTTCAATAAGACCAGATAACATGTCCGAGTATAGTAAGCA
GATGCAGAGATTTAATGTCGGAGAGGACTGTCCAGTGTTTGATGGGCTCTTTGAGTTTTGTCAGCTTTCAACTGGTGGTT
CAGTTGCTGGGGCTGTGAAGTTAAACCGACAACAAACTGATATGGCTGTTAACTGGGCTGGAGGATTACATCATGCTAAG
AAATCAGAAGCATCAGGATTCTGTTATGTTAATGATATTGTGCTTGCCATCCTTGAATTACTAAAGTATCATCAGAGAGT
CTTATATATTGATATTGATATCCATCATGGTGATGGTGTTGAAGAAGCTTTTTATACAACAGATCGTGTAATGACTGTAT
CATTCCATAAATATGGGGAATACTTTCCTGGAACAGGAGACTTGAGGGATATTGGTGCTGGAAAAGGCAAATACTATGCT
GTCAATTTTCCAATGAGAGATGGTATAGATGATGAATCATATGGGCAGATATTTAAGCCTATTATTTCAAAAGTGATGGA
GATGTATCAACCTAGTGCTGTGGTGCTACAGTGTGGTGCAGACTCACTATCCGGTGATAGACTTGGTTGCTTCAATTTGA
CAGTCAAAGGTCATGTTAAATGTGTGGAAGTCGTAAAATTCAATTTACCATTACTGATGCCTGGGGGAGGTGGATACACA
ATCCGCAATGTTGCTCGATGTTGGACATACGAGACTGCTGTTGCCCTTGATTGTGAGATTCCCAATGAATTGCCATATAA
TGATTACTTTGAGTATTTTGGACCAGACTTCAAACTGCATATTAGTCCTTCAAACATGACAAACCAGAACACTCCAGAAT
ATATGGAAAAGATAAAACAGCGTTTATTTGAAAATTTACGCATGTTGCCACATGCACCTGGAGTCCAAATGCAAGCTATT
CCAGAAGATGCAGTTCATGAAGACAGTGGAGATGAAGATGGAGAAGATCCAGACAAGAGAATTTCTATTCGAGCATCAGA
CAAACGGATAGCTTGTGATGAAGAATTCTCAGATTCTGAGGACGAAGGAGAGGGAGGTCGTAGAAATGTGGCTGATCATA
AGAAAGGAGCAAAGAAAGCTAGAATTGAAGAAGACAAGAAGGAAACGGAGGACAAAAAAACAGATGTTAAAGAAGAAGAT
AAGTCCAAGGACAACAGTGGTGAAAAAACAGATACCAAAGGAGCCAAATCAGAACAGCTCAGCAACCCTTGA

Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000002649 ortholog_one2many 1 retrogene
retro_cint_18,
Echinops telfairi ENSETEG00000008468 ortholog_one2many 1 retrogene
retro_etel_488,
Myotis lucifugus ENSMLUG00000003117 ortholog_one2many 4 retrogenes
retro_mluc_1570, retro_mluc_225, retro_mluc_2548, retro_mluc_935,
Monodelphis domestica ENSMODG00000017860 ortholog_one2one 1 retrogene
retro_mdom_597,
Ornithorhynchus anatinus ENSOANG00000003631 ortholog_one2one 1 retrogene
retro_oana_79,
Pan troglodytes ENSPTRG00000018519 ortholog_one2one 1 retrogene
retro_ptro_69,
Sorex araneus ENSSARG00000000354 ortholog_one2one 1 retrogene
retro_sara_651,
Ictidomys tridecemlineatus ENSSTOG00000012779 ortholog_one2one 1 retrogene
retro_itri_374,
Tarsius syrichta ENSTSYG00000009363 ortholog_one2one 4 retrogenes
retro_tsyr_1337, retro_tsyr_1355, retro_tsyr_681, retro_tsyr_765,
Tursiops truncatus ENSTTRG00000001613 within_species_paralog 1 retrogene
retro_ttru_1236,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_462 93.39 84.91
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Download FASTA sequences of all ENSTTRG00000015043 retrocopies