Parental gene:

RPL7A, ENSMLUG00000004666

Aliases:None
Description:None
Organism:Microbat (Myotis lucifugus)
Coordinates:AAPE02064059:4438..6955(-)


>ENSMLUG00000004666
TCTGCCCAGCCGAAGGGGAAGAAGGCCAAGGGGAAGAAGGTGGCTCCGGCCCCTGCCGTCGTGAAGAAGCAGGAGGCCAA
GAAGGTGGTCAACCCCCTGTTCGAGAAGCGGCCCAAGAACTTTGGCATCGGACAGGACATCCAGCCCAAAAGGGACCTCA
CCCGCTTTGTCAAGTGGCCCCGCTACATCCGGCTGCAGCGGCAAAGGGCTATTCTCTACAAGCGGCTGAAAGTGCCGCCC
GCCATCAACCAGTTCACCCAGGCCCTGGACCGCCAGACAGCCACTCAGCTGCTGAAGCTGGCCCACAAGTACAGGCCCGA
GACCAAGCAAGAGAAGAAGCAGAGGTTGCTGGCTCGGGCTGAGAAAAAAGCTGCCGGCAAAGGGGATGTTCCCACCAAGA
GGCCTCCTGTCCTCCGAGCAGGGGTGAACACGGTCACCACCCTGGTGGAGAACAAGAAGGCCCAGCTGGTGGTGATAGCG
CACGACGTGGACCCCATCGAGCTGGTGGTCTTCCTGCCCGCCCTGTGCCGGAAGATGGGGGTCCCCTACTGCATCATCAA
GGGGAAGGCCAGGCTGGGGCGCCTCGTCCACAGGAAGACCTGCACCACTGTCGCCTTCACACAGGTTAACTCGGAAGACA
AGGGAGCTCTGGCGAAGCTGGTGGAGGCCATCCGGACCAACTACAACGACAGATACGACGAGATCCGCCGCCACTGGGGA
GGCAACGTCCTGGGTCCAAAGTCGGTGGCTCGCATTGCCAAGCTGGAGAAGGCCAAGGCGAAGGAGCTGGCCACTAAGCT
GGGCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011708 ortholog_one2one 29 retrogenes
Canis familiaris ENSCAFG00000017680 ortholog_one2one 36 retrogenes
Callithrix jacchus ENSCJAG00000014827 ortholog_one2many 3 retrogenes
Cavia porcellus ENSCPOG00000001324 ortholog_one2one 4 retrogenes
Dipodomys ordii ENSDORG00000006471 ortholog_one2one 3 retrogenes
Felis catus ENSFCAG00000005825 ortholog_one2one 20 retrogenes
Gorilla gorilla ENSGGOG00000014442 possible_ortholog 48 retrogenes
Loxodonta africana ENSLAFG00000006436 ortholog_one2one 2 retrogenes
Macropus eugenii ENSMEUG00000014550 ortholog_one2one 16 retrogenes
Macaca mulatta ENSMMUG00000022341 ortholog_one2one 9 retrogenes
Monodelphis domestica ENSMODG00000012754 ortholog_one2one 3 retrogenes
Mus musculus ENSMUSG00000062647 possible_ortholog 10 retrogenes
Nomascus leucogenys ENSNLEG00000013068 possible_ortholog 22 retrogenes
Otolemur garnettii ENSOGAG00000014027 ortholog_one2one 16 retrogenes
Pongo abelii ENSPPYG00000019730 possible_ortholog 52 retrogenes
Rattus norvegicus ENSRNOG00000049097 possible_ortholog 10 retrogenes
Sarcophilus harrisii ENSSHAG00000004337 ortholog_one2one 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000003671 possible_ortholog 3 retrogenes
Tupaia belangeri ENSTBEG00000008595 possible_ortholog 26 retrogenes
Tursiops truncatus ENSTTRG00000007645 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mluc_541 74.10 51.12
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2. retro_mluc_558 70.55 52.24
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3. retro_mluc_670 75.30 93.66
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4. retro_mluc_1033 66.23 55.22
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5. retro_mluc_1087 68.26 83.96
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6. retro_mluc_1359 75.97 94.40
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7. retro_mluc_1365 75.26 69.78
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8. retro_mluc_1745 77.34 74.25
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9. retro_mluc_1877 71.58 66.79
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10. retro_mluc_2074 79.56 65.30
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Download FASTA sequences of all ENSMLUG00000004666 retrocopies