Parental gene: | SUPT20H, ENSMMUG00000003590 |
| Aliases: | None |
| Description: | suppressor of Ty 20 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20596] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 17:16213445..16256109(-) |
>ENSMMUG00000003590
CAGCAACAAGCTTTAGAACTAGCTTTGGATCGTGCAGAGTATGTCATTGAAAGTGCCCGACAGAGACCTCCTAAAAGGAA
ATACCTATCAAGTGGAAGAAAATCTGTATTTCAAAAACTTTATGACTTGTATATTGAAGAATGTGAAAAAGAACCTGAGG
TTAAGAAATTAAGAAGAAATGTGAACTTGTTAGAGAAGCTTGTTATGCAAGAGACTTTGTCATGTTTAGTGGTCAATCTG
TACCCAGGAAATGAGGGATATTCTCTGATGCTCAGGGGAAAAAACGGATCAGATTCTGAGACCATTCGACTGCCCTATGA
AGAAGGAGAGTTGCTTGAATATTTGGATGCAGAAGAATTACCTCCTATTTTGGTCGATCTCCTAGAAAAATCTCAGGTTA
ATATTTTTCATTGCGGATGTGTCATAGCAGAAATACGTGACTACAGGCAGTCCAGTAACATGAAATCTCCTGGTTACCAA
AGTCGGCACATTCTCTTACGTCCAACAATGCAGACTTTAATTTGTGATGTACATTCAATAACAAGTGATAACCATAAATG
GACCCAGGAAGACAAACTTCTGCTTGAGAGCCAGCTCATCCTAGCTACAGCTGAACCACTCTGTCTTGATCCTTCTATAG
CAGTCACCTGCACTGCAAACAGACTGCTCTATAACAAGCAAAAGATGAACACTCGCCCAATGAAACGGTGTTTCAAGCGG
TATTCCAGATCCTCTCTGAATCGGCAGCAAGATCTGTCTCATTGTCCACCTCCTCCTCAGCTGAGGTTACTTGATTTCTT
ACAAAAAAGAAAGGAAAGAAAAGCAGGTCAGCATTATGACCTCAAAATTTCTAAAGCAGGAAATTGTGTAGATATGTGGA
AACGGAGTCCCTGTAATTTGGCCATACCTTCTGAAGTAGATGTGGAGAAATATGCTAAAGTGGAAAAGTCTATCAAATCT
GATGACTCACAGCCAACAGTCTGGCCAGCCCATGACGTAAAAGATGATTATGTATTTGAATGTGAAACTGGTACTCAGTA
TCAGAAAACAAAGCTGACCATCTTGCAGTCGCTTGGAGATCCACTTTACTATGGTAAAATACAGCCATGTAAAGCAGATG
AAGAAAGTGACAGCCAGATGTCTCCATCACACTCCTCCACAGATGATCATTCAAATTGGTTCGTTATTGGATCAAAGACC
GATGCCGAGAGGGTAGTCAATCAGTACCAAGAATTAGTCCAGAATGAAGCCAAATGTCCGGTCAAGATGTCACACAGCTC
CAGTGGCTCAGCCAGTCTGAGTCAGGTTTCTCCAGGGAAAGAAACAGAACAAACTGAAACTGTGTCAGTTCAGTCTTCAG
TACTGGGGAAGGGCGTAAAACATCGACCCCCACCAATCAAACTGCCCTCAAGCTCAGGAAATAGTTCCTCAGGTAACTAT
TTTACGCCACAACAGACAAGCAGCTTTCTCAAATCTCCAACTCCTCCTCCTTCTTCTAAGCCATCAAGTATTCCTCGGAA
ATCATCTGTGGATCTCAATCAAGTTAGCATGCTTTCTCCAGCTGCCCTATCACCTGCCAGCTCATCACAAAGAACCACGG
CCACCCAGGTCATGGCAAACTCTGCTGGACTTAACTTCATCAATGTAGTGGGCTCTGTTTGTGGGGCCCAGGCTTTGATG
AGTGGTTCAAACCCCATGCTGGGCTGTAACACAGGTGCCATAACTCCTGCAGGAATAAACCTGAGCGGCCTTCTACCCTC
AGGAGGTCTGCTACCAAATGCATTGCCCAGTGCAATGCAGGCAGCTTCTCAAGCAGGTCAGAATGTTGGAAATAATAAC
CAGCAACAAGCTTTAGAACTAGCTTTGGATCGTGCAGAGTATGTCATTGAAAGTGCCCGACAGAGACCTCCTAAAAGGAA
ATACCTATCAAGTGGAAGAAAATCTGTATTTCAAAAACTTTATGACTTGTATATTGAAGAATGTGAAAAAGAACCTGAGG
TTAAGAAATTAAGAAGAAATGTGAACTTGTTAGAGAAGCTTGTTATGCAAGAGACTTTGTCATGTTTAGTGGTCAATCTG
TACCCAGGAAATGAGGGATATTCTCTGATGCTCAGGGGAAAAAACGGATCAGATTCTGAGACCATTCGACTGCCCTATGA
AGAAGGAGAGTTGCTTGAATATTTGGATGCAGAAGAATTACCTCCTATTTTGGTCGATCTCCTAGAAAAATCTCAGGTTA
ATATTTTTCATTGCGGATGTGTCATAGCAGAAATACGTGACTACAGGCAGTCCAGTAACATGAAATCTCCTGGTTACCAA
AGTCGGCACATTCTCTTACGTCCAACAATGCAGACTTTAATTTGTGATGTACATTCAATAACAAGTGATAACCATAAATG
GACCCAGGAAGACAAACTTCTGCTTGAGAGCCAGCTCATCCTAGCTACAGCTGAACCACTCTGTCTTGATCCTTCTATAG
CAGTCACCTGCACTGCAAACAGACTGCTCTATAACAAGCAAAAGATGAACACTCGCCCAATGAAACGGTGTTTCAAGCGG
TATTCCAGATCCTCTCTGAATCGGCAGCAAGATCTGTCTCATTGTCCACCTCCTCCTCAGCTGAGGTTACTTGATTTCTT
ACAAAAAAGAAAGGAAAGAAAAGCAGGTCAGCATTATGACCTCAAAATTTCTAAAGCAGGAAATTGTGTAGATATGTGGA
AACGGAGTCCCTGTAATTTGGCCATACCTTCTGAAGTAGATGTGGAGAAATATGCTAAAGTGGAAAAGTCTATCAAATCT
GATGACTCACAGCCAACAGTCTGGCCAGCCCATGACGTAAAAGATGATTATGTATTTGAATGTGAAACTGGTACTCAGTA
TCAGAAAACAAAGCTGACCATCTTGCAGTCGCTTGGAGATCCACTTTACTATGGTAAAATACAGCCATGTAAAGCAGATG
AAGAAAGTGACAGCCAGATGTCTCCATCACACTCCTCCACAGATGATCATTCAAATTGGTTCGTTATTGGATCAAAGACC
GATGCCGAGAGGGTAGTCAATCAGTACCAAGAATTAGTCCAGAATGAAGCCAAATGTCCGGTCAAGATGTCACACAGCTC
CAGTGGCTCAGCCAGTCTGAGTCAGGTTTCTCCAGGGAAAGAAACAGAACAAACTGAAACTGTGTCAGTTCAGTCTTCAG
TACTGGGGAAGGGCGTAAAACATCGACCCCCACCAATCAAACTGCCCTCAAGCTCAGGAAATAGTTCCTCAGGTAACTAT
TTTACGCCACAACAGACAAGCAGCTTTCTCAAATCTCCAACTCCTCCTCCTTCTTCTAAGCCATCAAGTATTCCTCGGAA
ATCATCTGTGGATCTCAATCAAGTTAGCATGCTTTCTCCAGCTGCCCTATCACCTGCCAGCTCATCACAAAGAACCACGG
CCACCCAGGTCATGGCAAACTCTGCTGGACTTAACTTCATCAATGTAGTGGGCTCTGTTTGTGGGGCCCAGGCTTTGATG
AGTGGTTCAAACCCCATGCTGGGCTGTAACACAGGTGCCATAACTCCTGCAGGAATAAACCTGAGCGGCCTTCTACCCTC
AGGAGGTCTGCTACCAAATGCATTGCCCAGTGCAATGCAGGCAGCTTCTCAAGCAGGTCAGAATGTTGGAAATAATAAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 26 .18 RPM |
| SRP007412_brain | 33 .50 RPM |
| SRP007412_cerebellum | 56 .50 RPM |
| SRP007412_heart | 17 .67 RPM |
| SRP007412_kidney | 38 .14 RPM |
| SRP007412_liver | 13 .46 RPM |
| SRP007412_testis | 126 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000000116 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000102710 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000027507 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005288 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000005791 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000014609 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013227 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000007288 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_2479 | 61.23 | 94.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2555 | 57.86 | 92.87 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000003590 retrocopies