Parental gene: | SUPT20H, ENSVPAG00000007288 |
| Aliases: | None |
| Description: | suppressor of Ty 20 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20596] |
| Organism: | Alpaca (Vicugna pacos) |
| Coordinates: | GeneScaffold_2834:1766113..1853652(-) |
>ENSVPAG00000007288
ATGCAGCAAGCTTTAGAACTAGCTTTGGATCGTGCGGAGTATGTCATTGAAAGTGCCCGACAGAGACCTCCTAAAAGGAA
ATATCTATCTAGTGGAAGAAAATCTATATTTCAAAAACTTTATGACTTGTATATCGAAGAATGCGAAAAAGAGCCTGAGG
TTAAGAAATTAAGAAGAAATGTGAACTTGTTAGAGAAGCTTGTTATGCAAGAGACATTGTCATGTTTAGTGGTCAACCTA
TACCCAGGAAATGAGGGATATTCTCTGATGCTCAGGGGGAAAAATGGATCAGATTCTGAGACCATTCGACTGCCTTATGA
AGAAGGGGAATTGCTTGAATACTTAGATGCAGAGGAATTACCTCCTATTTTGGTTGACCTCCTGGAAAAATCTCAGGTTA
ATATTTTTCATTGTGGATGCGTCATAGCAGAAATACGTGACTACAGGCAGTCCAGTAATATGAAATCTCCTGGTTACCAA
AGTAGGCACATTCTCTTACGTCCAACGATGCAGACTTTAATCTGTGATGTACATTCAATAACAAGTGATAACCATAAATG
GACCCAGGAAGACAAACTTTTGCTTGAGAGCCAGCTGATTCTGGCTACGGCAGAACCACTGTGTCTTGATCCTTCTATAG
CTGTAACCTGCACTGCAAACAGGCTGCTCTATAACAAGCAGAAGATGAACACGCGCCCCATGAAACGGTGTTTCAAGAGG
TATTCCAGATCCTCTCTGAATCGGCAGCAGGATCTGTCTAATTGTCCGCCTCCTCCTCAGCTAAAATTACTTGATTTCTT
ACAAAAAAGGAAGGAAAGAAAAGCAGGTCAGCATTATGACCTCAAAATTTCTAAAGCAGGAAATTGTGTAGATATGTGGA
AACGGAGTCCCTGTAATTTGGCCATACCTTCTGAAGTGGACGTGGAAAAATACGCCAAAGTGGAAAAGTCTATCAAATCT
GATGACTCACAACCAACAGTCTGGCCAGCCCATGATATAAAAGATGATTATGTGTTTGAATGTGAAGCTGGTAATCAGTA
TCAGAAAACAAAGCTGACCATTTTGCAGTCACTTGGTGATCCACTTTACTATGGTAAAATACAGCCGTGTAAAGAAGATG
AAGAAAGTGACAGCCAGATGTCTCCATCTCACTTCTCCACAGATGATCATTCAAATTGGTTCATTATTGGATCAAAGACT
GATGCTGAGAGAGTAGTCAATCAGTACCAGGAATTGGTCCAGAATGAAGCCAAATGTCCAGTGAAGATGTCACATAGCTC
CAGTGGCTCCGCCAGCTTGAGTCAGCCTTCTCCAGGGAAAGAAGCAGAACAGCCTGAGACCGTGTCAGTTCAGCCTTCAG
TACTGGGGAAGGGAGTGAAGCATAGACCTCCACCCATCAAACTTCCCTCGGGCTCAGGAAGTAGTTCCTCAGGTAACTAT
TTCACACCACAGCAGGCCAGCAGCTTTCTTAAATCTCCGACTCCTCCTCCTACTTCTAAGCCACCAAGTCTTTCTCGGAA
GTCATCTGTGGACCTCAGTCAAGTGAGCATGCTCTCTCCAGCTGCCCTGTCACCTGCCAGTTCATCACAAAGAAGCACGG
CCACCCAGGTCATGGCAAACTCTGCTGGACTTAACTTCATCAATGTAGTGGGCTCTGTTTGTGGAGCTCAAGCTTTGATG
AGTGGTTCCAACCCTATGCTGGGCTGTAACACTGGTGCCATAACTCCTGCAGGAATAAACCTGAGTGGCCTTCTACCCTC
AGGAGGTCTGTTACCAAGTGCATTGCCCGGTGCAATGCAGGCAGCTTCTCAAGCAGGTGTTCCATTTGGTTTAAAAAATA
CTTCAAGTCTCAGGCCCTTAAATCTACTCCAGCTTCCAGGAGGTTCGCTCATTTTTAACACTCTGCAGCAGCAGCAGCAG
CAGCTCCCTCAGTTTACACAACAGCAGCCTCAGCAACCCACAGCTTCTAGTCCTCAGCAGCCCGGGGAGCAGGCTGCTGA
ACAAAGTTCATCTAGTCAAGAACAGGCCTTACCTGCTCAGCACACTGCCGTCATTAACCTTGCTGGAGTAGGGAGTTTTA
TGCAGTCACAGGCAGCTGTGTTGTCTCAGCTTGGCTCTGCCGAGAACAGACCTGAGCAAAGCCTTCCTCAGCAGAGATTC
CAGCTCTCCTCTGCCTTTCAACAGCAGCAGCAACAGATCCAACAGTTGCGATTCTTGCAGCATCAAATGGCTATGGCGGC
GGCGGCGGCACAAACAGCGCAGCTCCCCCGGCACCGGCACACAGGCAGCCAGTCAAAAAGTAAAGTGAAGAGAGGCGCGC
CGACCACTCCGAAATTCTGA
ATGCAGCAAGCTTTAGAACTAGCTTTGGATCGTGCGGAGTATGTCATTGAAAGTGCCCGACAGAGACCTCCTAAAAGGAA
ATATCTATCTAGTGGAAGAAAATCTATATTTCAAAAACTTTATGACTTGTATATCGAAGAATGCGAAAAAGAGCCTGAGG
TTAAGAAATTAAGAAGAAATGTGAACTTGTTAGAGAAGCTTGTTATGCAAGAGACATTGTCATGTTTAGTGGTCAACCTA
TACCCAGGAAATGAGGGATATTCTCTGATGCTCAGGGGGAAAAATGGATCAGATTCTGAGACCATTCGACTGCCTTATGA
AGAAGGGGAATTGCTTGAATACTTAGATGCAGAGGAATTACCTCCTATTTTGGTTGACCTCCTGGAAAAATCTCAGGTTA
ATATTTTTCATTGTGGATGCGTCATAGCAGAAATACGTGACTACAGGCAGTCCAGTAATATGAAATCTCCTGGTTACCAA
AGTAGGCACATTCTCTTACGTCCAACGATGCAGACTTTAATCTGTGATGTACATTCAATAACAAGTGATAACCATAAATG
GACCCAGGAAGACAAACTTTTGCTTGAGAGCCAGCTGATTCTGGCTACGGCAGAACCACTGTGTCTTGATCCTTCTATAG
CTGTAACCTGCACTGCAAACAGGCTGCTCTATAACAAGCAGAAGATGAACACGCGCCCCATGAAACGGTGTTTCAAGAGG
TATTCCAGATCCTCTCTGAATCGGCAGCAGGATCTGTCTAATTGTCCGCCTCCTCCTCAGCTAAAATTACTTGATTTCTT
ACAAAAAAGGAAGGAAAGAAAAGCAGGTCAGCATTATGACCTCAAAATTTCTAAAGCAGGAAATTGTGTAGATATGTGGA
AACGGAGTCCCTGTAATTTGGCCATACCTTCTGAAGTGGACGTGGAAAAATACGCCAAAGTGGAAAAGTCTATCAAATCT
GATGACTCACAACCAACAGTCTGGCCAGCCCATGATATAAAAGATGATTATGTGTTTGAATGTGAAGCTGGTAATCAGTA
TCAGAAAACAAAGCTGACCATTTTGCAGTCACTTGGTGATCCACTTTACTATGGTAAAATACAGCCGTGTAAAGAAGATG
AAGAAAGTGACAGCCAGATGTCTCCATCTCACTTCTCCACAGATGATCATTCAAATTGGTTCATTATTGGATCAAAGACT
GATGCTGAGAGAGTAGTCAATCAGTACCAGGAATTGGTCCAGAATGAAGCCAAATGTCCAGTGAAGATGTCACATAGCTC
CAGTGGCTCCGCCAGCTTGAGTCAGCCTTCTCCAGGGAAAGAAGCAGAACAGCCTGAGACCGTGTCAGTTCAGCCTTCAG
TACTGGGGAAGGGAGTGAAGCATAGACCTCCACCCATCAAACTTCCCTCGGGCTCAGGAAGTAGTTCCTCAGGTAACTAT
TTCACACCACAGCAGGCCAGCAGCTTTCTTAAATCTCCGACTCCTCCTCCTACTTCTAAGCCACCAAGTCTTTCTCGGAA
GTCATCTGTGGACCTCAGTCAAGTGAGCATGCTCTCTCCAGCTGCCCTGTCACCTGCCAGTTCATCACAAAGAAGCACGG
CCACCCAGGTCATGGCAAACTCTGCTGGACTTAACTTCATCAATGTAGTGGGCTCTGTTTGTGGAGCTCAAGCTTTGATG
AGTGGTTCCAACCCTATGCTGGGCTGTAACACTGGTGCCATAACTCCTGCAGGAATAAACCTGAGTGGCCTTCTACCCTC
AGGAGGTCTGTTACCAAGTGCATTGCCCGGTGCAATGCAGGCAGCTTCTCAAGCAGGTGTTCCATTTGGTTTAAAAAATA
CTTCAAGTCTCAGGCCCTTAAATCTACTCCAGCTTCCAGGAGGTTCGCTCATTTTTAACACTCTGCAGCAGCAGCAGCAG
CAGCTCCCTCAGTTTACACAACAGCAGCCTCAGCAACCCACAGCTTCTAGTCCTCAGCAGCCCGGGGAGCAGGCTGCTGA
ACAAAGTTCATCTAGTCAAGAACAGGCCTTACCTGCTCAGCACACTGCCGTCATTAACCTTGCTGGAGTAGGGAGTTTTA
TGCAGTCACAGGCAGCTGTGTTGTCTCAGCTTGGCTCTGCCGAGAACAGACCTGAGCAAAGCCTTCCTCAGCAGAGATTC
CAGCTCTCCTCTGCCTTTCAACAGCAGCAGCAACAGATCCAACAGTTGCGATTCTTGCAGCATCAAATGGCTATGGCGGC
GGCGGCGGCACAAACAGCGCAGCTCCCCCGGCACCGGCACACAGGCAGCCAGTCAAAAAGTAAAGTGAAGAGAGGCGCGC
CGACCACTCCGAAATTCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000000116 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000102710 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000027507 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003590 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000005288 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000005791 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000014609 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000013227 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_vpac_193 | 61.45 | 93.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSVPAG00000007288 retrocopies