Parental gene: | SDHC, ENSMMUG00000012411 |
| Aliases: | None |
| Description: | succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Source:RefSeq peptide;Acc:NP_001180516] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 1:139929278..139973333(+) |
>ENSMMUG00000012411
ATGGCTGCGCTCTTGCTGAGACATGTTGGTCGTCATTGCCTCCGAGCCCACTTTAGCCCTCAGCTCTGTATCAGAAATGC
TGTTCCTTTGGGAACCACAGCCAAAGAAGAGATGGAGCGGTTCTGGAATAAGAATATAAGTTCAAACCGTCCTGTATCTC
CCCACATCACTATCTACAGTTGGTCTCTTCCCATGGCGATGTCCATCTGCCACCGTGGCACTGGTATTGCTTTGAGTGCA
GGGGTCTCTCTTTTTGGCATGTCGGCCCTGTTACTCCCTGGGAACTTTGAGTCTTATTTGGAACTCGTGAAGTCCCTGTG
TCTGGGGCCAGCACTGATCCACACAGCTAAGTTTGCACTCGTCTTCCCTCTCATGTATCATACCTGGAATGGGATCCGAC
ACTTGATGTGGGACCTAGGAAAAGGCCTGAAGATTCCCCAGCTATACCAGTCTGGAGTGGTTGTCCTGGTTCTTACTGTG
TTGTCCTCTATGGGGCTGGCAGCCATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .11 RPM |
| SRP007412_brain_prefrontal_cortex | 10 .47 RPM |
| SRP007412_cerebellum | 0 .65 RPM |
| SRP007412_heart | 0 .82 RPM |
| SRP007412_kidney | 0 .59 RPM |
| SRP007412_liver | 1 .43 RPM |
| SRP007412_testis | 0 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015351 | ortholog_one2many | 2 retrogenes | |
| Bos taurus | ENSBTAG00000015853 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000012992 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004757 | ortholog_one2many | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000015767 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000000499 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000143252 | ortholog_one2many | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008017 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014439 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014367 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000001585 | possible_ortholog | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000005544 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000003163 | ortholog_one2many | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000016835 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000030318 | ortholog_one2many | 2 retrogenes | |
| Takifugu rubripes | ENSTRUG00000001873 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009234 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_239 | 100.00 | 68.05 | Please wait, loading  |
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| 2. | retro_mmul_369 | 94.08 | 100.00 | Please wait, loading |
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| 3. | retro_mmul_672 | 81.48 | 94.67 | Please wait, loading |
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| 4. | retro_mmul_1063 | 83.00 | 57.99 | Please wait, loading |
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| 5. | retro_mmul_1323 | 88.24 | 100.00 | Please wait, loading |
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| 6. | retro_mmul_1338 | 70.55 | 85.21 | Please wait, loading |
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| 7. | retro_mmul_1686 | 86.14 | 59.17 | Please wait, loading |
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| 8. | retro_mmul_1845 | 76.47 | 69.82 | Please wait, loading |
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| 9. | retro_mmul_2002 | 85.57 | 56.80 | Please wait, loading |
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| 10. | retro_mmul_2087 | 84.78 | 81.07 | Please wait, loading |
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| 11. | retro_mmul_2416 | 86.23 | 98.82 | Please wait, loading |
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Download FASTA sequences of all ENSMMUG00000012411 retrocopies