Parental gene:

MMU.2453, ENSMMUG00000016077

Aliases:None
Description:isocitrate dehydrogenase [Source:RefSeq peptide;Acc:NP_001252708]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:12:72115684..72134250(-)


>ENSMMUG00000016077
ATGTCCAAAAAAATCAGTGGCGGTTCTGTGGTAGAGCTGCAAGGAGATGAAATGACACGAATCATTTGGGAATTGATTAA
AGAGAAACTCATTTTTCCCTATGTGGAATTGGATCTACAGAGCTATGATTTAGGCATAGAGAATCGTGATGCCACCAACG
ACCAGGTCACCAAGGATGCTGCAGAAGCTATAAAGAAGTATAATGTTGGCGTCAAATGTGCCACTATCACTCCTGATGAG
AAGAGGGTTGAGGAGTTCAAGTTGAAACAAATGTGGAAATCACCAAATGGCACCATACGAAATATTCTGGGTGGCACGGT
CTTCAGAGAAGCCATTATCTGCAAAAATATCCCCCGGCTTGTGAGTGGATGGGTAAAACCTATCATCATAGGTCGTCATG
CTTACGGGGATCAATACAGAGCAACTGATTTTGTTGTTCCTGGGCCTGGAAAAGTAGAGATAACCTACACACCAAGTGAT
GGAACCCAAAAGGTGACATACCTGGTACATAACTTTGAAGAGGGTGGTGGTGTTGCCATGGGGATGTATAATCAAGATAA
GTCAATTGAAGATTTTGCACACAGTTCCTTCCAAATGGCTCTGTCTAAGGGTTGGCCTTTGTATCTGAGCACCAAAAACA
CTATTCTGAAGAAATATGATGGGCGTTTTAAAGACATCTTTCAGGAGATATATGACAAGCAGTACAAGTCCCAATTTGAA
GCCCAAAAGATCTGGTATGAGCATAGGCTCATCGATGACATGGTGGCCCAAGCTATGAAATCAGAGGGAGGCTTCATCTG
GGCCTGTAAAAACTATGATGGTGACGTGCAGTCGGACTCTGTGGCCCAAGGGTATGGCTCTCTCGGCATGATGACCAGTG
TGCTGGTTTGTCCAGATGGCAAGACAGTAGAAGCAGAGGCTGCCCACGGGACTGTAACCCGTCACTACCGCATGTACCAG
AAAGGACAGGAGACGTCCACCAATCCCATTGCTTCCATTTTTGCCTGGACCAGAGGGTTAGCCCACAGAGCAAAGCTTGA
TAACAATAAAGAACTTGCCTTCTTTGCAAATGCTTTGGAAGAAGTCTGTATTGAGACAATTGAGGCTGGCTTCATGACCA
AGGACTTGGCCGCTTGCATTAAAGGTTTACCCAATGTGCAACGTTCTGACTACTTGAATACATTTGAGTTCATGGACAAA
CTTGGAGAAAACTTGAAGATCAAACTAGCTCAGGCCAAACTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .42 RPM
SRP007412_brain 21 .18 RPM
SRP007412_cerebellum 14 .53 RPM
SRP007412_heart 45 .87 RPM
SRP007412_kidney 137 .20 RPM
SRP007412_liver 233 .54 RPM
SRP007412_testis 42 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020527 ortholog_one2one 1 retrogene
retro_btau_1235,
Choloepus hoffmanni ENSCHOG00000004574 ortholog_one2one 2 retrogenes
retro_chof_2158, retro_chof_897,
Cavia porcellus ENSCPOG00000013587 ortholog_one2one 1 retrogene
retro_cpor_1010,
Homo sapiens ENSG00000138413 ortholog_one2one 1 retrogene
retro_hsap_3554,
Gorilla gorilla ENSGGOG00000012619 ortholog_one2one 1 retrogene
retro_ggor_2400,
Microcebus murinus ENSMICG00000009797 ortholog_one2one 1 retrogene
retro_mmur_1364,
Nomascus leucogenys ENSNLEG00000007143 ortholog_one2one 3 retrogenes
retro_nleu_1169, retro_nleu_2328, retro_nleu_3117,
Otolemur garnettii ENSOGAG00000014848 ortholog_one2one 4 retrogenes
retro_ogar_1488, retro_ogar_2270, retro_ogar_2925, retro_ogar_3057,
Pongo abelii ENSPPYG00000013125 ortholog_one2one 2 retrogenes
retro_pabe_2935, retro_pabe_926,
Pan troglodytes ENSPTRG00000012865 ortholog_one2one 1 retrogene
retro_ptro_2415,
Sus scrofa ENSSSCG00000023264 ortholog_one2one 1 retrogene
retro_sscr_549,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1817 87.38 51.45
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Download FASTA sequences of all ENSMMUG00000016077 retrocopies