Parental gene:

MMU.1607, ENSMMUG00000016981

Aliases:None
Description:26S proteasome non-ATPase regulatory subunit 10 [Source:RefSeq peptide;Acc:NP_001248034]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:106800863..106808772(-)


>ENSMMUG00000016981
ATGGAGGGGTGTGTGTCTAACCTAATGGTCTGCAACCTGGCCTACAGCGGGAAGCTGGAAGAGTTGAAGGAGAGTATTCT
GGCCGATAAATCCCTGGCTACTAGAACTGACCAGGACAGGAGAACTGCATTGCACTGGGCATGCTCAGCTGGACATACAG
AAATTGTTGAATTTTTGTTGCAACTTGGAGTGCCAGTGAATGATAAAGATGATGCAGGTTGGTCTCCTCTTCATATTGCA
GCTTCTGCTGGCCGGGATGAGATTGTAAAAGCCCTTCTGGGAAAAGGTGCTCAAGTGAATGCTGTCAATCAAAATGGCTG
TACTCCCCTACATTATGCAGCTTCCAAAAACAGGCATGAGATCGCTGTCATGTTACTAGAAGGTGGGGCTAATCCAGATG
CTAAGGACCATTATGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGGTAACTTGAAGATGATTCATATCCTTCTGTAC
TACAAAGCATCCACAAACATCCAAGACACTGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAGGAGAGAGTGGAAGA
AGCAAAACTGCTGGTGTCCCAAGGAGCAAGTATTTACATTGAGAATAAAGAAGAAAAGACACCCCTGCAAGTGGCCAAAG
GCGGCCTGGGTTTAATACTCAAGAGAATGGTGGAAGGTTAA

Library Parental gene expression (RPM)
SRP007412_brain 32 .94 RPM
SRP007412_brain_prefrontal_cortex 25 .07 RPM
SRP007412_cerebellum 27 .06 RPM
SRP007412_heart 9 .95 RPM
SRP007412_kidney 15 .96 RPM
SRP007412_liver 10 .93 RPM
SRP007412_testis 9 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012006 ortholog_one2many 1 retrogene
retro_acar_134,
Callithrix jacchus ENSCJAG00000007717 possible_ortholog 1 retrogene
retro_cjac_2515,
Cavia porcellus ENSCPOG00000015068 ortholog_one2one 1 retrogene
retro_cpor_358,
Dasypus novemcinctus ENSDNOG00000001902 ortholog_one2many 5 retrogenes
retro_dnov_1194, retro_dnov_208, retro_dnov_705, retro_dnov_824, retro_dnov_835,
Homo sapiens ENSG00000101843 possible_ortholog 3 retrogenes
retro_hsap_1214, retro_hsap_2435, retro_hsap_2737,
Gorilla gorilla ENSGGOG00000002969 possible_ortholog 3 retrogenes
retro_ggor_1515, retro_ggor_1906, retro_ggor_945,
Microcebus murinus ENSMICG00000002059 ortholog_one2one 1 retrogene
retro_mmur_550,
Myotis lucifugus ENSMLUG00000014534 ortholog_one2one 1 retrogene
retro_mluc_2008,
Macaca mulatta ENSMMUG00000015254 within_species_paralog 2 retrogenes
retro_mmul_2397, retro_mmul_2444,
Nomascus leucogenys ENSNLEG00000014001 possible_ortholog 2 retrogenes
retro_nleu_243, retro_nleu_690,
Oryctolagus cuniculus ENSOCUG00000010837 possible_ortholog 1 retrogene
retro_ocun_793,
Otolemur garnettii ENSOGAG00000006419 possible_ortholog 1 retrogene
retro_ogar_213,
Procavia capensis ENSPCAG00000005221 ortholog_one2many 1 retrogene
retro_pcap_461,
Pongo abelii ENSPPYG00000020618 possible_ortholog 3 retrogenes
retro_pabe_1010, retro_pabe_1793, retro_pabe_2275,
Pan troglodytes ENSPTRG00000022169 possible_ortholog 3 retrogenes
retro_ptro_1407, retro_ptro_1851, retro_ptro_831,
Ictidomys tridecemlineatus ENSSTOG00000003783 possible_ortholog 3 retrogenes
retro_itri_1684, retro_itri_312, retro_itri_676,
Tarsius syrichta ENSTSYG00000009920 possible_ortholog 13 retrogenes
retro_tsyr_1160, retro_tsyr_1674, retro_tsyr_1684, retro_tsyr_1741, retro_tsyr_1830, retro_tsyr_1968, retro_tsyr_1989, retro_tsyr_2010, retro_tsyr_2138, retro_tsyr_2151, retro_tsyr_2167, retro_tsyr_674, retro_tsyr_803,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1290 83.33 65.49
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Download FASTA sequences of all ENSMMUG00000016981 retrocopies