Parental gene: | PSMD10, ENSTSYG00000009920 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 [Source:HGNC Symbol;Acc:9555] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_1464:65809..72505(-) |
>ENSTSYG00000009920
ATGGAGGGGTGTGTGTCTAACCTATTGGTCTGCAACCTGGCCTACAGCGGGAAGCTGGAGGAGTTGAAGGAGAGGATCCT
GGCAGATAAATCCCTGGCTACTAGAACTGATCAGGACAGCAGAACTGCATTGCATTGGGCATGCTCAGCCGGACATACAG
AAATTGTTGAATTTTTGTTGCAACTTGGAGTGCCAGTGAATGATAAAGACGATGCAGGTTGGTCTCCTCTTCATATTGCT
GCTTCTGCTGGCCGGGATGAGATTGTAAAAGCCCTTCTGGGAAAAGGTGCTCAAGTGAATGCTGTCAATCAAAACGGCTG
TACTCCCCTGCATTATGCCGCTTCCAAAAATAGGCATGAGATTGCTGTCATGTTACTAGAAGGTGGGGCTAATCCGGATG
CTAAGGACCATTATGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGGTAACTTGAAGATGATTCATATCCTTCTGTAC
TACAAAGCATCCACAAACATCCAAGACACTGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAAGAGAGAGTGGAAGA
AGCAAAACTGTTGGTGTCCCAAGGAGCAAGTATTGACATTGAGAATGAAGGAAAGACATCTCTGGTGGCCAAAGGTGGCC
TGGGTCTAATACCCAAGAGAATGGTGGAAGGTTAA
ATGGAGGGGTGTGTGTCTAACCTATTGGTCTGCAACCTGGCCTACAGCGGGAAGCTGGAGGAGTTGAAGGAGAGGATCCT
GGCAGATAAATCCCTGGCTACTAGAACTGATCAGGACAGCAGAACTGCATTGCATTGGGCATGCTCAGCCGGACATACAG
AAATTGTTGAATTTTTGTTGCAACTTGGAGTGCCAGTGAATGATAAAGACGATGCAGGTTGGTCTCCTCTTCATATTGCT
GCTTCTGCTGGCCGGGATGAGATTGTAAAAGCCCTTCTGGGAAAAGGTGCTCAAGTGAATGCTGTCAATCAAAACGGCTG
TACTCCCCTGCATTATGCCGCTTCCAAAAATAGGCATGAGATTGCTGTCATGTTACTAGAAGGTGGGGCTAATCCGGATG
CTAAGGACCATTATGAGGCTACAGCAATGCACCGGGCAGCAGCCAAGGGTAACTTGAAGATGATTCATATCCTTCTGTAC
TACAAAGCATCCACAAACATCCAAGACACTGAGGGTAACACTCCTCTACACTTAGCCTGTGATGAAGAGAGAGTGGAAGA
AGCAAAACTGTTGGTGTCCCAAGGAGCAAGTATTGACATTGAGAATGAAGGAAAGACATCTCTGGTGGCCAAAGGTGGCC
TGGGTCTAATACCCAAGAGAATGGTGGAAGGTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000012006 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007717 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000015068 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000001902 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000101843 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000002969 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000016981 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014001 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010837 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006419 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000005221 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020618 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000022169 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000003783 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000542 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_674 | 73.83 | 66.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_803 | 70.00 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_1160 | 67.35 | 65.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tsyr_1674 | 89.87 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_tsyr_1684 | 74.57 | 73.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_tsyr_1741 | 71.81 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_tsyr_1830 | 99.33 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_tsyr_1968 | 73.15 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_tsyr_1989 | 73.15 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_tsyr_2010 | 71.81 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_tsyr_2138 | 68.67 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_tsyr_2151 | 67.55 | 66.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_tsyr_2167 | 77.12 | 52.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000009920 retrocopies