Parental gene:

FAM64A, ENSMMUG00000017760

Aliases:None
Description:family with sequence similarity 64, member A [Source:HGNC Symbol;Acc:25483]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:6162235..6169237(+)


>ENSMMUG00000017760
ATGGCTTCTCGGTGGCAGAGCATGGGGACCTCTGTGCGCCGGAGATCTCTCCGGCACCAGGAGCAGCTGGAGGACAGCAA
GGAGCTGCAGCCTGTGGCCAGCCATCAGGAGACCTCTGCAGGGGCCCTGGGGTCTCTGTGCAGGCAGTTCCAAAGGAGGC
TGCCCCTGAGAGCCGTCAACCTCAACCTCTGCACAGGCCCCTCCTGGAAACGCCTGGAAACCCCAGAGCCAGGTCAGCAG
GGCCTCCAGGCTGCAGCTCGCTCAGCTAAGAGCGCTTTGGGTGCCATGTCCCAGAGAATCCAGGAGTCCTGCCAAAGTGG
CACCAAGTGGCTGGTGGAGACGCACGTGAAGGCCAGGAGGCGGAAGAGAGGAGCACAGACGGGCAGTGGATCCCCAGCTC
ACAGCCTGAGCCAGAAGAGCACTCGGCTGTCTGGAGCCGCCCCTGCCCACTCAGCCACAGAGCCCTGGGAGAAGGAGCGT
CACCACCTCTCTGCCCGGATGGGCTCACGTGCCCACCCATCACGGCGGTCAAGGCGGGAGGCTGCCTTCCGGAGCCCCTA
CTCCTCAACAGAGCCCCTCTGCTCTCCCAGGCAATCTGACAGTGACCCAGAGCCTGTGGGGGCGGGAATTCAGCATCTCC
AGAAGCTGTCCCAAGAGCTAGAGGAAGCCATCATGGCNNNNNNCAGGAAACAAGCCCTGTCTGACCGCCAAGTCTTCGTA
CTCAAGGATGTCTATGCTTCCCCGTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .22 RPM
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .06 RPM
SRP007412_heart 0 .06 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006997 ortholog_one2many 1 retrogene
retro_amel_1136,
Homo sapiens ENSG00000129195 ortholog_one2one 3 retrogenes
retro_hsap_2371, retro_hsap_3030, retro_hsap_3071,
Gorilla gorilla ENSGGOG00000012309 ortholog_one2one 3 retrogenes
retro_ggor_1801, retro_ggor_2091, retro_ggor_2109,
Mus musculus ENSMUSG00000020808 ortholog_one2many 1 retrogene
retro_mmus_3385,
Nomascus leucogenys ENSNLEG00000009164 ortholog_one2one 3 retrogenes
retro_nleu_361, retro_nleu_725, retro_nleu_843,
Otolemur garnettii ENSOGAG00000027433 ortholog_one2many 1 retrogene
retro_ogar_1490,
Pongo abelii ENSPPYG00000007877 ortholog_one2one 3 retrogenes
retro_pabe_2141, retro_pabe_2509, retro_pabe_2545,
Pan troglodytes ENSPTRG00000008641 ortholog_one2one 3 retrogenes
retro_ptro_1734, retro_ptro_2044, retro_ptro_2070,
Rattus norvegicus ENSRNOG00000008040 ortholog_one2many 1 retrogene
retro_rnor_1325,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_959 75.85 86.13
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2. retro_mmul_1778 55.41 60.50
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3. retro_mmul_1935 74.38 100.00
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Download FASTA sequences of all ENSMMUG00000017760 retrocopies