Parental gene:

NUDCD2, ENSMODG00000007641

Aliases:None
Description:NudC domain containing 2 [Source:HGNC Symbol;Acc:30535]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:360185133..360192573(-)


>ENSMODG00000007641
ATGACCTACCGGCAGGGTGGGCAAAGACGCTTCCGCGCCTGCGCTCTGCGCCGAGGTACCGTGGCTGGTACTCTCCGAGG
GCAGCTGGGAGCAGAGGGAAGCATGTCTGCACCGTTTGAGGAGCGAAGCGGGGTAGTGCCTTGCGGGACACCCTGGGGCC
AGTGGTACCAGACTCTAGAGGAGGTGTTTATCGAAGTTCAGGTGCCCCCGGGCACTCGCGCGCAGGAGATCCAGTGCGGC
CTGCAGAGTCGGCATGTGGAGCTCGCTGTGCGGGGCCAGGAGATCCTCAAGGGCAAACTCTTTGATTCTACAATAGCTGA
TGAGGGAACGTGGACATTAGAGGACAGAAAAATGGTTCGCATAGTTCTTACCAAGACAAAGAGAGATGCTGCAAATTGTT
GGACATCTCTCTTAGAAACTGAGTATGCAGCTGATCCATGGGTACAGGACCAAATGCAAAGGAAACTTACCCTGGAGAGA
TTCCAGAAAGAAAACCCGGGTTTTGACTTCAGTGGAGCAGAAATCTCAGGAAACTACAGTAAAGGTGGACCAGATTTCTC
TAGTCTTGAAAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 26 .46 RPM
SRP007412_cerebellum 18 .61 RPM
SRP007412_heart 20 .93 RPM
SRP007412_kidney 19 .75 RPM
SRP007412_liver 30 .71 RPM
SRP007412_testis 25 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005270 ortholog_one2one 1 retrogene
retro_amel_535,
Bos taurus ENSBTAG00000014772 ortholog_one2one 1 retrogene
retro_btau_1735,
Callithrix jacchus ENSCJAG00000015367 ortholog_one2one 1 retrogene
retro_cjac_2093,
Cavia porcellus ENSCPOG00000000877 ortholog_one2one 1 retrogene
retro_cpor_936,
Dipodomys ordii ENSDORG00000014291 ortholog_one2one 1 retrogene
retro_dord_188,
Macropus eugenii ENSMEUG00000004802 ortholog_one2one 1 retrogene
retro_meug_1673,
Myotis lucifugus ENSMLUG00000001670 ortholog_one2one 1 retrogene
retro_mluc_1154,
Ornithorhynchus anatinus ENSOANG00000021414 ortholog_one2one 1 retrogene
retro_oana_122,
Oryctolagus cuniculus ENSOCUG00000005783 ortholog_one2one 1 retrogene
retro_ocun_819,
Otolemur garnettii ENSOGAG00000024929 ortholog_one2one 3 retrogenes
retro_ogar_1486, retro_ogar_1696, retro_ogar_482,
Sarcophilus harrisii ENSSHAG00000007551 ortholog_one2one 1 retrogene
retro_shar_559,
Ictidomys tridecemlineatus ENSSTOG00000028665 ortholog_one2one 1 retrogene
retro_itri_1770,
Tupaia belangeri ENSTBEG00000000307 ortholog_one2one 1 retrogene
retro_tbel_507,
Tarsius syrichta ENSTSYG00000008090 ortholog_one2one 1 retrogene
retro_tsyr_1638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1058 81.63 50.79
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2. retro_mdom_2016 83.48 60.21
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Download FASTA sequences of all ENSMODG00000007641 retrocopies