Parental gene:

SLC5A1, ENSMODG00000009915

Aliases:None
Description:solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:HGNC Symbol;Acc:11036]
Organism:Opossum (Monodelphis domestica)
Coordinates:3:513321607..513500369(+)


>ENSMODG00000009915
ATGGACGTCAGCGCGAGCACCATTGCCCGGTCTGGGACCCCCGCGGCAATCCTTTCTTCGGATCGCTTCAAGAATGCTGC
GGACATCTTAGTCATTATCTTGTACTTCGTGGTGGTTTTGGCCGTGGGGCTGTGGGCCATGTTTTCAACTAATCGTGGGA
CAGTTGGAGGCTTCTTCCTGGCGGGCCGGAGTATGGTGTGGTGGCCGATTGGTGCCTCCCTCTTTGCTAGTAACATCGGC
AGTGGTCACTTCGTGGGACTGGCTGGAACTGGGGCAGCAGCAGGCATTGCCACAGGAGGCTTTGAATGGAATGCCCTGGT
ACTTGTGGTTGTCCTGGGATGGGTGTTTGTTCCCATCTACATCAAGGCTGGGGTGGTGACAATGCCAGAATACCTGAGGA
AGCGATTTGGTGGAAAGAGGATACAAATCTATCTGTCTGTCCTATCTTTGCTCCTTTACATTTTTACCAAGATCTCGGCT
GACATCTTCTCAGGAGCCATATTTATTAATTTGGCTTTGGGGCTTGACTTGTACTTGGCCATCTTTCTCCTCTTGGCCAT
CACTGGTCTTTATACAATCACAGGGGGCCTGGCAGCTGTGATCTACACAGATACTTTACAAACTGCAATCATGCTGGTGG
GATCCCTCATCCTGACAGGTTTTGCTTTTAATGAAGTTGGGGGCTATGAAGCTTTCATGGACAAGTACATGAAATCCATC
CCAAGCAAAATCTCTGAGGGGAACTTCACTGCCAAGCCTGAGTGCTACACCCCGAGGGCAGATTCATTTCATCTGTTCCG
TGATCCCATCACTGGAGACCTCCCCTGGCCAGGCCTTATCTTTGGTCTGGGCATTCTTGCGCTGTGGTACTGGTGCACTG
ATCAGGTCATCGTGCAGAGGTGTCTCTCTGCCAAGAACATGTCCCACGTGAAGGCTGGCTGCATAATGTGTGGTTATCTG
AAGCTGCTGCCCATGTTTCTTATGGTGATGCCTGGCATGATAAGTCGAATACTCTACACAGATAAGGTGGCCTGTGCCGT
TCCTTCAGAATGTGAAGCCCAATGTGGGACCAAAGTAGGCTGTAGCAACATTGCCTACCCAACACTGGTGGTGGAACTCA
TGCCAAATGGTCTTCGTGGTCTGATGCTTTCCGTCATGTTGGCCTCCCTCATGAGCTCCCTCACCTCCATCTTCAACAGT
GCCAGCACTCTGTTCACCATGGACATCTACACCAAATGCCGGAAGAAGGCATCTGAGAAGGAGCTAATGATAGCGGGAAG
AGTGTTCATCCTGGTACTAATTGGCATCAGCATCGCTTGGGTGCCTATTGTGCAGTCGGCTCAAAGTGGGCAGCTCTTTG
ACTACATCCAGTCTATCACCAGTTACCTGGGACCACCTATTGCTGCCGTTTTCCTGCTTGCTATTTTCTGCAAGAGAGTC
AATGAACCGGGTGCCTTTTGGGGGCTTATTTTTGGACTTCTTATTGGACTGTCTCGAATGATCGCTGAGTTTGCCTATGG
AACAGGCAGCTGTATGGAGCCCAGCAACTGTCCCAAGATAATTTGTGGTGTTCATTACCTTTATTTTGCCATTATCCTGT
TTGCAGTCTCTGTCATCACCATTTTAATAATCTCCCTCTTGACCAAGCCCATCCCAGATGTGCATCTTTACCGCCTATGT
TGGAGTTTGAGGAACAGCAAGGAAGAGCGAATTGATTTGGATGCAGATGAAGAGAAGGACTTCTCAGATAGTTCTGAAGA
AAAGTTGGAAATAGAAATCCCTCCGGAGGATAAGGGATGCTGCAGGAAGGCCTATGACATGTTCTGTGGACTGGACCAGC
AGAAAGGTCCCAAAATGACCAAGGAGGAGGAGGCTGCCCTCAAGATGAAAATGACAGACACATCAGAGAAGCCCTTGTGG
AGAAATATTGTCAACATCAATGGCATCATCCTCTTGGCTGTGGCTGTCTTCTGCCATGCTTACTTTGCATAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000007944 ortholog_many2many 1 retrogene
retro_apla_5,
Choloepus hoffmanni ENSCHOG00000005940 ortholog_one2one 1 retrogene
retro_chof_2,
Callithrix jacchus ENSCJAG00000011369 ortholog_one2one 1 retrogene
retro_cjac_2033,
Ficedula albicollis ENSFALG00000007384 ortholog_one2many 1 retrogene
retro_falb_29,
Homo sapiens ENSG00000100170 ortholog_one2one 1 retrogene
retro_hsap_105,
Gallus gallus ENSGALG00000006728 ortholog_one2many 1 retrogene
retro_ggal_2,
Mustela putorius furo ENSMPUG00000012749 ortholog_one2one 1 retrogene
retro_mputfur_837,
Oryctolagus cuniculus ENSOCUG00000017569 ortholog_one2one 1 retrogene
retro_ocun_1633,
Otolemur garnettii ENSOGAG00000003370 ortholog_one2one 1 retrogene
retro_ogar_2513,
Ochotona princeps ENSOPRG00000010458 ortholog_one2one 1 retrogene
retro_opri_6,
Procavia capensis ENSPCAG00000015157 ortholog_one2one 1 retrogene
retro_pcap_3,
Rattus norvegicus ENSRNOG00000017775 ortholog_one2one 1 retrogene
retro_rnor_794,
Ictidomys tridecemlineatus ENSSTOG00000006386 ortholog_one2one 1 retrogene
retro_itri_13,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1324 54.73 79.03
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Download FASTA sequences of all ENSMODG00000009915 retrocopies