Parental gene:

SLC5A1, ENSSTOG00000006386

Aliases:None
Description:solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:HGNC Symbol;Acc:11036]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393565.1:1467786..1535027(-)


>ENSSTOG00000006386
ATGGACAGTAGCACCTGGAGCCCATCGCCCACCACCGCTGCTGCTCCAGTGGAATCCTATGAGCGCATCCGAAATGCTGC
GGACATCTCTGTCATTGTCATCTACTTTGTGGTTGTGATGGCCGTCGGGCTATGGGCTATGTTTTCCACCAATCGTGGGA
CAGTCGGAGGTTTTTTCCTGGCAGGCCGAAGTATGGTGTGGTGGCCGATTGGAGCCTCTCTCTTCGCCAGTAACATTGGA
AGTGGCCACTTTGTGGGGCTGGCTGGGACTGGAGCAGCTTCAGGGATTGCCACTGGAGCCTTTGAATGGAATGCCCTGTT
TTTGGTGGTTGTGCTGGGCTGGATATTTGTTCCCATTTACATAAAGGCTGGGGTAGTGACAATGCCAGAGTACCTGCGGA
AGAGGTTTGGAGGCAAGCGGATCCAGATTTACCTTTCTGTTCTGTCCCTGCTGCTCTATATATTCACTAAGATCTCGGCA
GACATCTTCTCTGGAGCCATATTCATCAATCTGGCTTTGGGCCTGGATATATACCTGGCCATCTTTATCTTATTAGCAAT
TACTGGGCTTTACACAATCACAGCCTGCGTAGGGGGCCTGGCAGCTGTGATCTACACGGACACCTTGCAGACAGCAATTA
TGCTGGTGGGGTCTTTTATCCTGACTGGGTTTGCTTTCAATGAAGTGGGAGGGTATGAAGCCTTCATGGAAAAGTATATG
AAAGCCATTCCAACCTTAATTTCTGATGGAAACACCACCATCAAGGAAGAATGCTACACTCCAAGGGAAGACTCCTTCCA
CATCTTCCGAGATCCCCTGAAGGGAGACCTCCCATGGCCTGGGCTCATCTTTGGGCTGGCCATCCTCGCCTTGTGGTACT
GGTGCACGGATCAGGTGATTGTGCAGCGCTGCCTCTCAGCCAAGAATATGTCTCACGTGAAGGCCGGCTGTACCCTGTGT
GGGTACATGAAGCTGCTGCCCATGTTCCTCATGGTGATGCCAGGGATGATCAGCCGCATTCTCTACACAGAAAAAATTGC
CTGTGTCATTCCTTCAGAATGTAAAAAATATTGTGGCACCCCAGTTGGCTGTACCAACATCGCCTACCCCACCTTGGTGG
TGGAGCTCATGCCTAATGGATTGCGAGGCCTGATGCTGTCAGTCATGATGGCTTCTCTCATGAGCTCCCTAACTTCCATC
TTCAACAGTGCCAGCACCCTCTTCACCATGGACATCTACACGAAGATCCGGAAGCAAGCATCTGAGAAAGAGCTCATGAT
TGCAGGAAGGTTGTTCATTCTCTTTCTGATTGCCATCAGCATTGCCTGGGTGCCCATTGTGCAGTCAGCACAAAGTGGGC
AGCTCTTTGATTATATCCAGTCCATTACCAGTTACTTGGGACCACCCATTGCAGCTGTCTTCCTGCTTGCTGTTTTCTGG
AAGAGAATCACTGAACCTGGAGCCTTTTGGGGACTCATCCTAGGATTTCTGATTGGAATTTCCCGTATGATTACTGAGTT
TGCCTATGGAACTGGGAGCTGCATGGAGCCCAGCAACTGTCCCACCATTATCTGTGGGGTCCACTACTTGTATTTTGCCA
TTATCCTCTTTGTCATTTCTGTCATCACCATTGTGGTCATCTCCCTGTTCACCAAGCCCATTCCAGATGTGCATCTCTAT
CGTCTGTGTTGGAGTCTTCGAAACAGCACAGAGGAACGTATTGACCTGGATGCAGAAGAGGAGGACCTCCAGGAATCCCC
GAAGGATACCATTGAAATAGGCCTTTCCCTTGATGCAGAAGTTCCTGAGGAGAGAAAAGGGTGCTTCAGGCGGGCCTATG
ACCTGTTCTGTGGGCTGGACCAGAAGGGACCTAAGATGACCAAGGAAGAGGAGGCAGCTATGAAGATGAAGCTGACAGAC
ACCTCTGAGAAGCCTTTGTGGAGGACAGTAGTGAACATCAATGGCATCATCCTGCTAGCTGTAGCTGTCTTTTGCCATGC
ATACTTTGCCTGA

Species Parental gene accession Homology type Retrogenes number
Anas platyrhynchos ENSAPLG00000007944 ortholog_many2many 1 retrogene
retro_apla_5,
Choloepus hoffmanni ENSCHOG00000005940 ortholog_one2one 1 retrogene
retro_chof_2,
Callithrix jacchus ENSCJAG00000011369 ortholog_one2one 1 retrogene
retro_cjac_2033,
Ficedula albicollis ENSFALG00000007384 ortholog_one2many 1 retrogene
retro_falb_29,
Homo sapiens ENSG00000100170 ortholog_one2one 1 retrogene
retro_hsap_105,
Gallus gallus ENSGALG00000006728 ortholog_one2many 1 retrogene
retro_ggal_2,
Monodelphis domestica ENSMODG00000009915 ortholog_one2one 1 retrogene
retro_mdom_1324,
Mustela putorius furo ENSMPUG00000012749 ortholog_one2one 1 retrogene
retro_mputfur_837,
Oryctolagus cuniculus ENSOCUG00000017569 ortholog_one2one 1 retrogene
retro_ocun_1633,
Otolemur garnettii ENSOGAG00000003370 ortholog_one2one 1 retrogene
retro_ogar_2513,
Ochotona princeps ENSOPRG00000010458 ortholog_one2one 1 retrogene
retro_opri_6,
Procavia capensis ENSPCAG00000015157 ortholog_one2one 1 retrogene
retro_pcap_3,
Rattus norvegicus ENSRNOG00000017775 ortholog_one2one 1 retrogene
retro_rnor_794,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_13 53.64 79.25
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Download FASTA sequences of all ENSSTOG00000006386 retrocopies