Parental gene:

ENSMODG00000017744

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:201726311..201729228(+)


>ENSMODG00000017744
AGGCGGTGCGGCGGGATTGAGATGGCGACGGAAGGCGATGTGGAGCTGGAGCTGGAAACAGAACCGAGTGGCCCAGAGCG
GCCGCCTGAGAAACCGCGGAAACATGACAGTGGCGCGGCTGACCTGGAACGAGTGACCGACTATGCAGAAGAGAAAGAGA
TCCAAAGCTCCAACTTGGAGACGGCGATGTCGGTGATTGGAGATCGACGGTCCCGGGAGCAGAAGGCCAAACAGGAACGG
GAGAAGGAACTGGCCAAAGTTACAATCAAGAAGGAAGATCTACTGATTATGACAGAGATGGAAATCTCACGGGCAGCTGC
AGAACGTAGTTTGCGGGAACACATGGGCAACGTAGTAGACGCTCTTATAACCCTTACCAACTAA

Library Parental gene expression (RPM)
SRP007412_brain 140 .77 RPM
SRP007412_cerebellum 118 .50 RPM
SRP007412_heart 157 .69 RPM
SRP007412_kidney 34 .24 RPM
SRP007412_liver 111 .27 RPM
SRP007412_testis 93 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002541 ortholog_one2many 2 retrogenes
retro_cjac_1352, retro_cjac_748,
Echinops telfairi ENSETEG00000007464 ortholog_one2many 3 retrogenes
retro_etel_1504, retro_etel_1616, retro_etel_1830,
Gorilla gorilla ENSGGOG00000014809 ortholog_one2many 1 retrogene
retro_ggor_2557,
Macropus eugenii ENSMEUG00000013059 ortholog_one2many 1 retrogene
retro_meug_1583,
Nomascus leucogenys ENSNLEG00000005454 ortholog_one2many 1 retrogene
retro_nleu_2150,
Oryctolagus cuniculus ENSOCUG00000001161 ortholog_one2many 2 retrogenes
retro_ocun_1395, retro_ocun_967,
Otolemur garnettii ENSOGAG00000010201 ortholog_one2many 1 retrogene
retro_ogar_1064,
Pongo abelii ENSPPYG00000006424 ortholog_one2many 1 retrogene
retro_pabe_3108,
Pan troglodytes ENSPTRG00000038721 ortholog_one2many 1 retrogene
retro_ptro_2582,
Rattus norvegicus ENSRNOG00000015703 ortholog_one2many 1 retrogene
retro_rnor_2477,
Ictidomys tridecemlineatus ENSSTOG00000006916 ortholog_one2many 2 retrogenes
retro_itri_1861, retro_itri_1864,
Tursiops truncatus ENSTTRG00000003726 ortholog_one2many 1 retrogene
retro_ttru_1499,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_26 93.39 94.49
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2. retro_mdom_306 51.72 67.72
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Download FASTA sequences of all ENSMODG00000017744 retrocopies