Parental gene:

HYPK, ENSPPYG00000006424

Aliases:None
Description:huntingtin interacting protein K [Source:HGNC Symbol;Acc:18418]
Organism:Orangutan (Pongo abelii)
Coordinates:15:40242149..40251610(+)


>ENSPPYG00000006424
ATGCGGCGGCGTGGTGAAACAGATATGGCGACTGAGGGGGATGTGGAGCTAGAGTTAGAGACTGAGACCAGTGGACCAGA
GCGGCCTCCCGAGAAGCCACGGAAACATGACAGCGGTGCGGCGGACTTGGAGCGGGTCACCGACTATGCAGAGGAGAAGG
AGATCCAGAGTTCCAATCTGGAGACGGCCATGTCTGTGATTGGAGACAGAAGGTCCCGGGAGCAGAAAGCCAAACAGGAG
CGGGAGAAAGAACTGGCAAAAGTCACTATCAAGAAGGAAGATCTGGAGCTGATAATGACCGAGATGGAGATATCTCGAGC
AGCAGCAGAACGCAGTTTGCGGGAACACATGGGCAACGTGGTAGAGGCGCTTATTGCCCTAACCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 38 .70 RPM
SRP007412_cerebellum 35 .02 RPM
SRP007412_heart 50 .75 RPM
SRP007412_kidney 72 .46 RPM
SRP007412_liver 67 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002541 ortholog_one2one 2 retrogenes
retro_cjac_1352, retro_cjac_748,
Echinops telfairi ENSETEG00000007464 ortholog_one2one 3 retrogenes
retro_etel_1504, retro_etel_1616, retro_etel_1830,
Gorilla gorilla ENSGGOG00000014809 ortholog_one2one 1 retrogene
retro_ggor_2557,
Macropus eugenii ENSMEUG00000013059 ortholog_one2one 1 retrogene
retro_meug_1583,
Monodelphis domestica ENSMODG00000017744 ortholog_one2many 2 retrogenes
retro_mdom_26, retro_mdom_306,
Nomascus leucogenys ENSNLEG00000005454 ortholog_one2one 1 retrogene
retro_nleu_2150,
Oryctolagus cuniculus ENSOCUG00000001161 ortholog_one2one 2 retrogenes
retro_ocun_1395, retro_ocun_967,
Otolemur garnettii ENSOGAG00000010201 ortholog_one2one 1 retrogene
retro_ogar_1064,
Pan troglodytes ENSPTRG00000038721 ortholog_one2one 1 retrogene
retro_ptro_2582,
Rattus norvegicus ENSRNOG00000015703 ortholog_one2one 1 retrogene
retro_rnor_2477,
Ictidomys tridecemlineatus ENSSTOG00000006916 ortholog_one2one 2 retrogenes
retro_itri_1861, retro_itri_1864,
Tursiops truncatus ENSTTRG00000003726 ortholog_one2one 1 retrogene
retro_ttru_1499,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3108 82.35 78.29
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Download FASTA sequences of all ENSPPYG00000006424 retrocopies