Parental gene:

HYPK, ENSOCUG00000001161

Aliases:None
Description:huntingtin interacting protein K (HYPK), mRNA [Source:RefSeq mRNA;Acc:NM_001171256]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:17:28541591..28543166(-)


>ENSOCUG00000001161
GGCGTGGCTGGTCGGCGGCGCGGTGGAGTAGATATGGCGACCGAGGGGGACGTGGAGCTGGAATTAGAGACTGAGACCAG
CGGCCCGGAGAGGCCTCCTGAGAAGCCACGCAAGCATGACAGTGGAGCGGCGGACCTGGAGCGGGTCACCGACTATGCGG
AAGAGAAGGAGATCCAGAGTTCCAATTTGGAGACGGCCATGTCAGTCATTGGAGACAGACGGTCCCGGGAGCAGAAGGCT
AAACAAGAGCGGGAGAAGGAACTGGCTAAAGTCACAATCAAGAAGGAAGATTTGGAGCTGATAATGACCGAGATGGAGAT
CTCTCGAGCAGCAGCAGAACGGAGCTTGCGGGAACACATGGGCAATGTGGTCGAGGCTCTTATTGCCCTAACCAACTGA

Library Parental gene expression (RPM)
SRP017611_liver 8 .17 RPM
SRP017611_kidney 21 .49 RPM
SRP017611_brain 34 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002541 ortholog_one2one 2 retrogenes
retro_cjac_1352, retro_cjac_748,
Echinops telfairi ENSETEG00000007464 ortholog_one2one 3 retrogenes
retro_etel_1504, retro_etel_1616, retro_etel_1830,
Gorilla gorilla ENSGGOG00000014809 ortholog_one2one 1 retrogene
retro_ggor_2557,
Macropus eugenii ENSMEUG00000013059 ortholog_one2one 1 retrogene
retro_meug_1583,
Monodelphis domestica ENSMODG00000017744 ortholog_one2many 2 retrogenes
retro_mdom_26, retro_mdom_306,
Nomascus leucogenys ENSNLEG00000005454 ortholog_one2one 1 retrogene
retro_nleu_2150,
Otolemur garnettii ENSOGAG00000010201 ortholog_one2one 1 retrogene
retro_ogar_1064,
Pongo abelii ENSPPYG00000006424 ortholog_one2one 1 retrogene
retro_pabe_3108,
Pan troglodytes ENSPTRG00000038721 ortholog_one2one 1 retrogene
retro_ptro_2582,
Rattus norvegicus ENSRNOG00000015703 ortholog_one2one 1 retrogene
retro_rnor_2477,
Ictidomys tridecemlineatus ENSSTOG00000006916 ortholog_one2one 2 retrogenes
retro_itri_1861, retro_itri_1864,
Tursiops truncatus ENSTTRG00000003726 ortholog_one2one 1 retrogene
retro_ttru_1499,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_967 58.11 56.06
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2. retro_ocun_1395 89.92 88.64
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Download FASTA sequences of all ENSOCUG00000001161 retrocopies