Parental gene:

ENSMODG00000019803

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:Un:83766371..83770704(+)


>ENSMODG00000019803
ATGAGAGATCCCCAAACAAAACGTTCCAGAGGCTTTGGCTTTGTGACTTATTCTTGTGTAGAAGAGGTAGATGCAGCTAT
GTGTGCTCGGCCACATAAGGTTGATGGACGTGTAGTAGAACCAAAGAGAGCTGTTTCTAGAGAGGATTCTGTAAAACCTG
GTGCACATCTAACCGTGAAGAAAATTTTTGTTGGTGGTATTAAAGAAGATACAGAAGAATATAATTTAAGAGACTACTTT
GAAAAGTATGGCAAGATCGAAACTATAGAAGTTATGGAAGATCGACAGAGTGGAAAGAAGAGAGGATTTGCATTTGTAAC
TTTTGATGATCATGATACAGTTGACAAAATTGTTGTTCAGAAATATCATACTATTAATGGGCATAACTGTGAGGTGAAAA
AAGCCCTTTCGAAGCAAGAGATGCAATCTGCTGGGTCACAAAGAGGTCGTGGAGGTGGTTCAGGCAATTTTATGGGACGA
GGAGGAAACTTTGGAGGTGGTGGTGGAAACTTTGGCCGTGGCGGAAACTTTGGTGGAAGAGATGGTGGATATAATGGATT
TGGTGGAGATGGTAAGACTTTTTCATGCTGTAACTATGGTGGCAGTGGGAACTATAATGATTTTGGAAATTATAGTGGGC
AGCAGCAATCAAATTATGGACCCATGAAAGGAGGCAGTTTTGGTGGAAGGAGCTCAGGCAGTCCTTATGGTGGTGGTTAT
GGATCTGGTGGTGGAAGTGGTGGATATGGTAGCAGAAGGTTCTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011920 ortholog_one2one 4 retrogenes
retro_amel_1407, retro_amel_557, retro_amel_715, retro_amel_765,
Cavia porcellus ENSCPOG00000004251 possible_ortholog 3 retrogenes
retro_cpor_1516, retro_cpor_1543, retro_cpor_65,
Ficedula albicollis ENSFALG00000003215 ortholog_one2many 1 retrogene
retro_falb_15,
Gallus gallus ENSGALG00000009250 ortholog_one2many 1 retrogene
retro_ggal_10,
Monodelphis domestica ENSMODG00000011916 other_paralog 6 retrogenes
retro_mdom_1496, retro_mdom_1789, retro_mdom_1951, retro_mdom_2017, retro_mdom_546, retro_mdom_981,
Mustela putorius furo ENSMPUG00000014103 possible_ortholog 6 retrogenes
retro_mputfur_1141, retro_mputfur_1336, retro_mputfur_1545, retro_mputfur_603, retro_mputfur_674, retro_mputfur_779,
Oryctolagus cuniculus ENSOCUG00000002743 possible_ortholog 2 retrogenes
retro_ocun_994, retro_ocun_995,
Otolemur garnettii ENSOGAG00000025948 possible_ortholog 3 retrogenes
retro_ogar_1685, retro_ogar_3010, retro_ogar_3175,
Pongo abelii ENSPPYG00000012967 possible_ortholog 1 retrogene
retro_pabe_450,
Pelodiscus sinensis ENSPSIG00000003011 ortholog_one2many 1 retrogene
retro_psin_16,
Pan troglodytes ENSPTRG00000012676 possible_ortholog 5 retrogenes
retro_ptro_1059, retro_ptro_2430, retro_ptro_2966, retro_ptro_683, retro_ptro_872,
Rattus norvegicus ENSRNOG00000001556 possible_ortholog 11 retrogenes
retro_rnor_1510, retro_rnor_1665, retro_rnor_1869, retro_rnor_2053, retro_rnor_2659, retro_rnor_2669, retro_rnor_2713, retro_rnor_2776, retro_rnor_2809, retro_rnor_348, retro_rnor_959,
Sarcophilus harrisii ENSSHAG00000018255 possible_ortholog 1 retrogene
retro_shar_518,
Tarsius syrichta ENSTSYG00000012949 ortholog_one2one 2 retrogenes
retro_tsyr_1480, retro_tsyr_2122,
Tursiops truncatus ENSTTRG00000014225 possible_ortholog 3 retrogenes
retro_ttru_1459, retro_ttru_675, retro_ttru_9,
Xenopus tropicalis ENSXETG00000001806 ortholog_one2many 1 retrogene
retro_xtro_11,
Xiphophorus maculatus ENSXMAG00000000439 ortholog_one2many 1 retrogene
retro_xmac_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1590 56.07 91.73
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMODG00000019803 retrocopies