Parental gene: | Pced1a, ENSMUSG00000037773 |
| Aliases: | Pced1a, A930025D01Rik, AI480484, Fam113a |
| Description: | PC-esterase domain containing 1A [Source:MGI Symbol;Acc:MGI:2442177] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:130417246..130424701(-) |
>ENSMUSG00000037773
ATGGTCTTCTGTTTGGAAAACGAGATGCCACACCGCCTGCTGGGAAGCGCCATGGTCCACTTCCATGCCTCAGAAGTCCA
GCAGCTGCTACACAACAAGTTCGTGGTCATTTTGGGGGACTCCATCCAAAGAGCTGTGTATAAGGACCTGGTGCTTCTGC
TCCAGAAAGACACACTGCTCACAGCTTCCCAGTTAAAAGCCAAGGGGGAGCTGAGCTTTGAACAGGACCAGCTGGTGGCT
GGGGGCCAGCTGGGAGAGCTGCACAACGGGACACAGTACCGCGAGGTCCGCCAGTTCTGCTCTGGCTCTGGCCACCACCT
TGTGCGCTTCTACTTCCTCACCCGAGTTTACTCCGAGTACCTTGAGGACATCCTGGAGGAGCTGTCATATGGACCTGCCC
CTGACCTAGTGATCATCAACTCCTGCCTCTGGGATCTCTCCAGATATGGCCGCTGCTCAATGGAGAGCTACAGGGAGAAC
CTGGAACGAGTCTTTGTACGAATGGACCAGGTTTTACCAGACTCTTGTCTGCTGGTGTGGAACTTGGCAATGCCTCTGGG
GGAACGTGTCACTGGGGGTTTCCTCCTGCCAGAGCTCCAGCCCCTGGCAGTGTCTCTGCGACAGGATGTGGTTGAGGGGA
ACTTCTACAGCGCTACACTAGCCGGGAAACACTGTTTCGACGTCCTAGATCTCCACTTCCATTTCCGGCATGCTGTCCGT
CACCGTCATCGAGATGGTGTCCATTGGGACCAGCATGCACACCGCCACCTCTCGCACTTACTTCTGGCCCACGTGGCCGA
TGCCTGGGGTGTGGAGCTGCCCAAACATGACCGGCTGCCAGACCCATGGATTGAGGACTGGTCAGAGATGGATCATTCAT
TCCAGGGAAGCCATAAGCAGCCCCCAGACTTCAGGGAGAAGCTGGCCTTGCCCCTGCTCCCACCTTTCCACTTGCCTCCT
CCCATGTCTTTTCCTTACCCACTTGAGCCCTCACCACCTCCCTTGTTCCCACCCCTGCCCCAGGATACCCCCTTTTTCCA
AGGCCAGCCCTTTCCACCCTATGAATTCAAATACAATGCAATGGAGGACTTCTCAATGCCAGGATGTGGCCCTGGAATGA
ACTTTGTGCCTGGCCCCCTGCCACCATCAGTCTCTGGCCCTGTCTCCCACGGTCAACACCGGGGCCCAGTGGTCCACCGG
GGCAAGCCACGTTGTGTTCTGAACAACCCCTACCATGTACCAAGAATTGGGGGTCCATGCAGGCATCGACTCAGACACTC
AGACAGACTGATCCACACATACAAACAGGACAGGCGGGGACATGCCCATTCGGGAACATGGCCTGGATAG
ATGGTCTTCTGTTTGGAAAACGAGATGCCACACCGCCTGCTGGGAAGCGCCATGGTCCACTTCCATGCCTCAGAAGTCCA
GCAGCTGCTACACAACAAGTTCGTGGTCATTTTGGGGGACTCCATCCAAAGAGCTGTGTATAAGGACCTGGTGCTTCTGC
TCCAGAAAGACACACTGCTCACAGCTTCCCAGTTAAAAGCCAAGGGGGAGCTGAGCTTTGAACAGGACCAGCTGGTGGCT
GGGGGCCAGCTGGGAGAGCTGCACAACGGGACACAGTACCGCGAGGTCCGCCAGTTCTGCTCTGGCTCTGGCCACCACCT
TGTGCGCTTCTACTTCCTCACCCGAGTTTACTCCGAGTACCTTGAGGACATCCTGGAGGAGCTGTCATATGGACCTGCCC
CTGACCTAGTGATCATCAACTCCTGCCTCTGGGATCTCTCCAGATATGGCCGCTGCTCAATGGAGAGCTACAGGGAGAAC
CTGGAACGAGTCTTTGTACGAATGGACCAGGTTTTACCAGACTCTTGTCTGCTGGTGTGGAACTTGGCAATGCCTCTGGG
GGAACGTGTCACTGGGGGTTTCCTCCTGCCAGAGCTCCAGCCCCTGGCAGTGTCTCTGCGACAGGATGTGGTTGAGGGGA
ACTTCTACAGCGCTACACTAGCCGGGAAACACTGTTTCGACGTCCTAGATCTCCACTTCCATTTCCGGCATGCTGTCCGT
CACCGTCATCGAGATGGTGTCCATTGGGACCAGCATGCACACCGCCACCTCTCGCACTTACTTCTGGCCCACGTGGCCGA
TGCCTGGGGTGTGGAGCTGCCCAAACATGACCGGCTGCCAGACCCATGGATTGAGGACTGGTCAGAGATGGATCATTCAT
TCCAGGGAAGCCATAAGCAGCCCCCAGACTTCAGGGAGAAGCTGGCCTTGCCCCTGCTCCCACCTTTCCACTTGCCTCCT
CCCATGTCTTTTCCTTACCCACTTGAGCCCTCACCACCTCCCTTGTTCCCACCCCTGCCCCAGGATACCCCCTTTTTCCA
AGGCCAGCCCTTTCCACCCTATGAATTCAAATACAATGCAATGGAGGACTTCTCAATGCCAGGATGTGGCCCTGGAATGA
ACTTTGTGCCTGGCCCCCTGCCACCATCAGTCTCTGGCCCTGTCTCCCACGGTCAACACCGGGGCCCAGTGGTCCACCGG
GGCAAGCCACGTTGTGTTCTGAACAACCCCTACCATGTACCAAGAATTGGGGGTCCATGCAGGCATCGACTCAGACACTC
AGACAGACTGATCCACACATACAAACAGGACAGGCGGGGACATGCCCATTCGGGAACATGGCCTGGATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 15 .56 RPM |
| SRP007412_cerebellum | 15 .94 RPM |
| SRP007412_heart | 9 .09 RPM |
| SRP007412_kidney | 12 .07 RPM |
| SRP007412_liver | 13 .30 RPM |
| SRP007412_testis | 29 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000003863 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000025475 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000016497 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000002886 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000132635 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000016578 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000028662 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000005200 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000004701 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010833 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000013185 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000006834 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000007168 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016356 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003464 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_332 | 61.11 | 67.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1001 | 76.35 | 85.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000037773 retrocopies