Parental gene: | PTPN11, ENSNLEG00000000078 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397363.1:833087..909372(+) |
>ENSNLEG00000000078
ATGGAACATCACGGGCAATTAAAAGAGAAGAATGGAGATGTCATTGAGCTTAAATATCCTCTGAACTGTGCAGATCCTAC
CTCTGAAAGGTGGTTTCATGGACACCTCTCTGGGAAAGAAGCAGAGAAATTATTAACTGAAAAAGGAAAACATGGTAGTT
TTCTTGTACGAGAGAGCCAGAGCCACCCTGGAGATTTTGTTCTTTCTGTGCGCACTGGTGATGACAAAGGGGAGAGCAAT
GACGGCAAGTCTAAAGTGACCCATGTTATGATTCGCTGTCAGGAACTGAAATACGATGTTGGTGGAGGAGAACGGTTTGA
TTCTTTGACAGATCTTGTGGAACATTATAAGAAGAATCCTATGGTGGAAACATTGGGTACAGTACTACAACTCAAGCAGC
CCCTTAACACGACTCGTATAAATGCTGCTGAAATAGAAAGCAGAGTTCGAGAACTGAGCAAATTAGCTGAGACCACAGAT
AAAGTCAAACAAGGCTTTTGGGAAGAATTTGAGACACTACAACAACAGGAGTGCAAACTTCTCTACAGCCGAAAAGAGGG
TCAAAGGCAAGAAAACAAAAACAAAAATAGATATAAAAACATCCTGCCCTTTGATCATACCAGGGTTGTCCTACACGATG
GTGATCCCAATGAGCCTGTTTCAGATTACATCAATGCAAATATCATCATGCCTGAATTTGAAACCAAGTGCAACAATTCA
AAGCCCAAAAAGAGTTACATTGCCACACAAGGCTGCCTGCAAAACACAGTGAATGACTTTTGGCGGATGGTGTTCCAAGA
AAACTCCCGAGTGATTGTCATGACAACGAAAGAAGTGGAGAGAGGAAAGAGTAAATGTGTCAAATACTGGCCTGATGAGT
ATGCTCTAAAAGAATATGGCGTCATGCGTGTTAGGAACGTCAAAGAAAGCGCCGCTCATGACTATACGCTAAGAGAACTT
AAACTTTCAAAGGTTGGACAAGCTCTACTCCAGGGGAATACGGAGAGAACGGTCTGGCAATACCACTTTCGGACCTGGCC
AGACCACGGAGTGCCCAGCGACCCCGGGGGCGTGCTGGACTTCCTGGAGGAGGTGCACCATAAGCAGGAGAGCATCATGG
ATGCAGGGCCGGTTGTGGTGCACTGCAGTGCTGGAATTGGCCGGACAGGGACGTTCATCGTGATTGATATTCTTATTGAC
ATCATCAGAGAGAAAGGTGTTGACTGCGACATTGACGTTCCCAAAACCATCCAGATGGTGCGGTCTCAGAGGTCAGGGAT
GGTCCAGACAGAAGCACAGTACCGATTTATCTATATGGCGGTCCAGCATTATATTGAAACACTACAGCGCAGGATTGAAG
AAGAGCAGAAAAGCAAGAGGAAAGGGCATGAATATACAAATATTAAGTATTCTCTAGCGGACCAGACGAGTGGAGATCAG
AGCCCCCTCCCGCCTTGTACTCCAACGCCACCCTGTGCAGAAATGAGAGAAGACAGTGCTAGAGTCTATGAAAACGTGGG
CCTGATGCAACAGCAGAAAAGTTTCAGATGA
ATGGAACATCACGGGCAATTAAAAGAGAAGAATGGAGATGTCATTGAGCTTAAATATCCTCTGAACTGTGCAGATCCTAC
CTCTGAAAGGTGGTTTCATGGACACCTCTCTGGGAAAGAAGCAGAGAAATTATTAACTGAAAAAGGAAAACATGGTAGTT
TTCTTGTACGAGAGAGCCAGAGCCACCCTGGAGATTTTGTTCTTTCTGTGCGCACTGGTGATGACAAAGGGGAGAGCAAT
GACGGCAAGTCTAAAGTGACCCATGTTATGATTCGCTGTCAGGAACTGAAATACGATGTTGGTGGAGGAGAACGGTTTGA
TTCTTTGACAGATCTTGTGGAACATTATAAGAAGAATCCTATGGTGGAAACATTGGGTACAGTACTACAACTCAAGCAGC
CCCTTAACACGACTCGTATAAATGCTGCTGAAATAGAAAGCAGAGTTCGAGAACTGAGCAAATTAGCTGAGACCACAGAT
AAAGTCAAACAAGGCTTTTGGGAAGAATTTGAGACACTACAACAACAGGAGTGCAAACTTCTCTACAGCCGAAAAGAGGG
TCAAAGGCAAGAAAACAAAAACAAAAATAGATATAAAAACATCCTGCCCTTTGATCATACCAGGGTTGTCCTACACGATG
GTGATCCCAATGAGCCTGTTTCAGATTACATCAATGCAAATATCATCATGCCTGAATTTGAAACCAAGTGCAACAATTCA
AAGCCCAAAAAGAGTTACATTGCCACACAAGGCTGCCTGCAAAACACAGTGAATGACTTTTGGCGGATGGTGTTCCAAGA
AAACTCCCGAGTGATTGTCATGACAACGAAAGAAGTGGAGAGAGGAAAGAGTAAATGTGTCAAATACTGGCCTGATGAGT
ATGCTCTAAAAGAATATGGCGTCATGCGTGTTAGGAACGTCAAAGAAAGCGCCGCTCATGACTATACGCTAAGAGAACTT
AAACTTTCAAAGGTTGGACAAGCTCTACTCCAGGGGAATACGGAGAGAACGGTCTGGCAATACCACTTTCGGACCTGGCC
AGACCACGGAGTGCCCAGCGACCCCGGGGGCGTGCTGGACTTCCTGGAGGAGGTGCACCATAAGCAGGAGAGCATCATGG
ATGCAGGGCCGGTTGTGGTGCACTGCAGTGCTGGAATTGGCCGGACAGGGACGTTCATCGTGATTGATATTCTTATTGAC
ATCATCAGAGAGAAAGGTGTTGACTGCGACATTGACGTTCCCAAAACCATCCAGATGGTGCGGTCTCAGAGGTCAGGGAT
GGTCCAGACAGAAGCACAGTACCGATTTATCTATATGGCGGTCCAGCATTATATTGAAACACTACAGCGCAGGATTGAAG
AAGAGCAGAAAAGCAAGAGGAAAGGGCATGAATATACAAATATTAAGTATTCTCTAGCGGACCAGACGAGTGGAGATCAG
AGCCCCCTCCCGCCTTGTACTCCAACGCCACCCTGTGCAGAAATGAGAGAAGACAGTGCTAGAGTCTATGAAAACGTGGG
CCTGATGCAACAGCAGAAAAGTTTCAGATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012464 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000179295 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010689 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013253 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009074 | other_paralog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000004976 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_522 | 84.30 | 99.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_561 | 87.64 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_1200 | 84.49 | 61.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_1360 | 89.27 | 79.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_1654 | 84.91 | 61.63 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000000078 retrocopies