Parental gene:

GOT2, ENSOCUG00000003871

Aliases:None
Description:Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P12345]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:5:14535640..14557213(-)


>ENSOCUG00000003871
ATGGCCCTGCTGCACTCCGCCCGCGTCCTCTCCGGGGTCGCCTCCGCCTTCCACCCAGGCCTCGCCGCCGCAGCCTCTGC
CAGAGCCAGCTCCTGGTGGGCCCATGTGGAGATGGGACCCCCAGATCCTATCCTGGGAGTTACAGAAGCCTACAAGAGAG
ACACAAACAGCAAAAAGATGAATCTGGGAGTTGGCGCCTACCGGGATGATAACGGGAAGCCTTACGTACTCCCTAGCGTC
CGGAAGGCAGAGGCTCAGATTGCTGCAAAAGGTCTCGACAAGGAATACCTGCCCATCGGGGGACTGGCTGAGTTCTGTAG
GGCATCGGCAGAACTAGCCCTGGGCGAGAACAGCGAAGTGGTGAAAAGCGGCCGGTTTGTCACCGTGCAGACCATCTCTG
GAACGGGGGCCCTAAGGATCGGAGCCAGTTTTCTGCAAAGGTTTTTCAAGTTCAGCCGAGATGTCTTTCTGCCCAAACCA
TCCTGGGGAAATCACACACCCATCTTCAGAGATGCTGGCATGCAGCTACAAAGCTATCGGTACTATGACCCCAAGACTTG
CGGTTTTGACTTCACAGGCGCCCTGGAGGACATCTCAAAAATTCCAGAGCAAAGTGTTCTTCTGTTGCATGCCTGTGCCC
ACAATCCCACAGGAGTGGATCCTCGGCCTGAGCAGTGGAAGGAAATAGCAACAGTGGTGAAGAAAAGGAATCTGTTCGCG
TTCTTTGACATGGCCTACCAAGGCTTTGCCAGTGGTGATGGTGACAAGGACGCCTGGGCTGTGCGCCACTTCATTGAACA
GGGCATTAATGTGTGTCTCTGCCAGTCATACGCCAAGAACATGGGCTTATATGGTGAACGTGTTGGAGCCTTCACTGTGA
TCTGCAAAGATGCAGATGAAGCCAAAAGGGTGGAGTCGCAGTTGAAGATCTTGATCCGTCCGATGTATTCCAACCCTCCT
ATCCATGGGGCCCGGATTGCCTCCACGATTCTGACTTCCCCGGATTTGCGAAAGCAATGGTTGCAGGAAGTGAAAGGCAT
GGCAGACCGCATCATTGGCATGCGGACCCAGCTGGTCTCCAACCTCAAGAAGGAAGGCTCCACCCACAGCTGGCAGCACA
TCACCGACCAGATTGGCATGTTTTGTTTCACAGGACTAAAGCCTGAACAGGTGGAGCGGCTGACCAAGGAGTTCTCCATC
TACATGACAAAGGACGGTCGCATCTCTGTGGCTGGCGTCACTTCTGGCAATGTGGGCTACCTTGCCCATGCCATTCACCA
GGTCACCAAGTAA

Library Parental gene expression (RPM)
SRP017611_liver 164 .02 RPM
SRP017611_kidney 101 .96 RPM
SRP017611_brain 103 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017346 possible_ortholog 3 retrogenes
retro_amel_1805, retro_amel_815, retro_amel_846,
Canis familiaris ENSCAFG00000008357 possible_ortholog 2 retrogenes
retro_cfam_586, retro_cfam_816,
Callithrix jacchus ENSCJAG00000011234 possible_ortholog 1 retrogene
retro_cjac_2916,
Gorilla gorilla ENSGGOG00000005767 possible_ortholog 3 retrogenes
retro_ggor_2912, retro_ggor_449, retro_ggor_774,
Macaca mulatta ENSMMUG00000006000 possible_ortholog 1 retrogene
retro_mmul_1337,
Mustela putorius furo ENSMPUG00000004862 possible_ortholog 1 retrogene
retro_mputfur_567,
Otolemur garnettii ENSOGAG00000000551 ortholog_one2one 2 retrogenes
retro_ogar_2182, retro_ogar_827,
Pongo abelii ENSPPYG00000007413 possible_ortholog 3 retrogenes
retro_pabe_3640, retro_pabe_823, retro_pabe_901,
Rattus norvegicus ENSRNOG00000011782 possible_ortholog 1 retrogene
retro_rnor_2695,
Tupaia belangeri ENSTBEG00000001808 ortholog_one2one 1 retrogene
retro_tbel_3799,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1516 92.63 100.00
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Download FASTA sequences of all ENSOCUG00000003871 retrocopies