Parental gene:

SLMO2, ENSOPRG00000002550

Aliases:None
Description:slowmo homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:15892]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_588:274682..280599(-)


>ENSOPRG00000002550
ATGAAGATCTGGACCTCGAAACACGTCTTTCACCGTCCATGTGCAACCGTTAAGACGGCTGCAATGCAGAAATACCCAAA
TCTAATGAACCCTAGCGTGGTGGGCGTGGACGTGCTGGACAGACACGTGGACCCCGCGGGGAAGCTGCACCACAGACTGC
TCAGCACCGAGTGGGGCCTGCCTTCCATTGTGAAATCTCTCATTGGAGCAGCGAGAACCAAAACGTACGTGCAGGAGCAC
TCGGTGGTCGATCCTGCGGAAAGAGTGATGGAACTCAACTCCACCAACATTTCATTTACAAATATGGTTTCAGTTGATGA
GAGACTTCTATACAAACCGCACCCTCAGGACCCGGGCAGAACTGTTCTTACTCAAGAAGCCATCATCACGGTGAAGGGCG
TCAGCCTTAGCAGTTACCTGGAAGGACTGATGGCCACTAGCATATCTTCCAATGCCAATAAGGGCCGAGAAGCCATGGAG
TGGGTAATCCGTAAGTTAAATGCTGAGCTCGAAGAACTGGCAGCGTCGGCGAGAGGGAGCTTACGGGCCCCGATGGCAGC
GGCCGCCTTTGCAGAGAAATGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018905 possible_ortholog 4 retrogenes
retro_cjac_1286, retro_cjac_2921, retro_cjac_3171, retro_cjac_3236,
Dasypus novemcinctus ENSDNOG00000014548 ortholog_one2one 3 retrogenes
retro_dnov_1402, retro_dnov_2032, retro_dnov_2311,
Echinops telfairi ENSETEG00000009651 ortholog_one2one 3 retrogenes
retro_etel_1130, retro_etel_1262, retro_etel_632,
Loxodonta africana ENSLAFG00000000300 ortholog_one2one 1 retrogene
retro_lafr_700,
Myotis lucifugus ENSMLUG00000014907 possible_ortholog 2 retrogenes
retro_mluc_1887, retro_mluc_845,
Macaca mulatta ENSMMUG00000007560 possible_ortholog 4 retrogenes
retro_mmul_1155, retro_mmul_1644, retro_mmul_2123, retro_mmul_539,
Monodelphis domestica ENSMODG00000016608 ortholog_one2one 5 retrogenes
retro_mdom_1596, retro_mdom_1619, retro_mdom_1620, retro_mdom_1655, retro_mdom_405,
Mus musculus ENSMUSG00000016257 ortholog_one2one 2 retrogenes
retro_mmus_2725, retro_mmus_630,
Oryctolagus cuniculus ENSOCUG00000005621 ortholog_one2one 8 retrogenes
retro_ocun_1944, retro_ocun_1954, retro_ocun_455, retro_ocun_486, retro_ocun_549, retro_ocun_619, retro_ocun_775, retro_ocun_926,
Rattus norvegicus ENSRNOG00000046644 ortholog_one2one 2 retrogenes
retro_rnor_422, retro_rnor_423,
Sorex araneus ENSSARG00000004671 ortholog_one2one 2 retrogenes
retro_sara_282, retro_sara_430,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_45 64.65 51.30
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2. retro_opri_141 79.47 95.85
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3. retro_opri_216 71.79 78.76
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4. retro_opri_663 63.46 79.79
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5. retro_opri_683 64.65 51.30
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6. retro_opri_770 79.47 95.85
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7. retro_opri_1069 71.79 78.76
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8. retro_opri_1090 63.16 76.17
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Download FASTA sequences of all ENSOPRG00000002550 retrocopies