Parental gene:

EEF1G, ENSOPRG00000014563

Aliases:None
Description:eukaryotic translation elongation factor 1 gamma [Source:HGNC Symbol;Acc:3213]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_3391:99728..104144(-)


>ENSOPRG00000014563
GTCTTGGAGCCTTCTTTCCGCCAGGCTTTTCCCAATACCAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTTCG
GGCCGTCTTGGGGGAGGTGAAGCTGTGTGAGAAGATGGCTCAATTCGATGCGAAGAAATTTGCAGAGAGCCAGCCGAAAA
AGGATACCCCACGGAAAGAGAAGGGCTCGCGGGAAGAGAAGCAGAAGCCCCAGGCTGAGCGGAAGGAGGAGAAGAAGGCA
GCTGCCCCAGCGCCCGAGGAAGAGATGGACGAGTGTGAGCAGGCCTTGGGCGCTGAGCCCAAGGCCAAGGACCCCTTTGC
NNNNNNNNNNNNNNNTACCTTTGTCCTGGATGAGTTTAAGCGCAAATACTCCAACGAGGACACCCTGTCTGTGGCGCTGC
CGTACTTCTGGGAACACTTTGACAAGGATGGCTGGTCCCTGTGGTACGCCGAGTACCGTTTCCCTGAGGAGCTCACGCAG
ACCTTCATGAGCTGCAACCTCATCACTGGAATGTTCCAGCGGTTGGACAAGCTGAGGAAGAATGCCTTTGCCAGTGTTAT
CCTCTTTGGCACCAACAACAGCAGCTCCATTTCTGGAATCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGCTGAGTC
CAGATTGGCAGGTGGACTACGAGTCGTACACATGGAGGAAACTGGATCCAAGCAGCGAGGAAACCCAGACGCTGGTCCGA
GAGTACTTTGCCTGGGAGGGGGCCTTCCAGCATGTGGGCAAAGCCTTCAATCAGGGCAAGGTGTTCAAGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011843 ortholog_one2one 1 retrogene
retro_btau_1600,
Canis familiaris ENSCAFG00000015834 possible_ortholog 6 retrogenes
retro_cfam_1241, retro_cfam_1398, retro_cfam_1862, retro_cfam_478, retro_cfam_638, retro_cfam_653,
Callithrix jacchus ENSCJAG00000018949 possible_ortholog 6 retrogenes
retro_cjac_1464, retro_cjac_1770, retro_cjac_1942, retro_cjac_3147, retro_cjac_841, retro_cjac_874,
Latimeria chalumnae ENSLACG00000014700 ortholog_one2one 1 retrogene
retro_lcha_82,
Myotis lucifugus ENSMLUG00000000342 ortholog_one2one 1 retrogene
retro_mluc_1110,
Monodelphis domestica ENSMODG00000007691 possible_ortholog 1 retrogene
retro_mdom_68,
Nomascus leucogenys ENSNLEG00000003528 possible_ortholog 2 retrogenes
retro_nleu_1510, retro_nleu_681,
Otolemur garnettii ENSOGAG00000000827 ortholog_one2one 1 retrogene
retro_ogar_1344,
Pan troglodytes ENSPTRG00000003768 possible_ortholog 3 retrogenes
retro_ptro_1879, retro_ptro_2017, retro_ptro_3159,
Pteropus vampyrus ENSPVAG00000003440 ortholog_one2one 1 retrogene
retro_pvam_1239,
Rattus norvegicus ENSRNOG00000020075 possible_ortholog 8 retrogenes
retro_rnor_1312, retro_rnor_2126, retro_rnor_2235, retro_rnor_2269, retro_rnor_2468, retro_rnor_2617, retro_rnor_2928, retro_rnor_979,
Sus scrofa ENSSSCG00000013064 ortholog_one2one 1 retrogene
retro_sscr_164,
Tursiops truncatus ENSTTRG00000002459 ortholog_one2one 3 retrogenes
retro_ttru_1082, retro_ttru_1544, retro_ttru_1603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_814 71.00 75.29
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Download FASTA sequences of all ENSOPRG00000014563 retrocopies