Parental gene:

PRDX5, ENSPPYG00000003106

Aliases:None
Description:peroxiredoxin 5 [Source:HGNC Symbol;Acc:9355]
Organism:Orangutan (Pongo abelii)
Coordinates:11:11647328..11651466(-)


>ENSPPYG00000003106
ATGCAAAATAAACATATTTTACTCCTACACAGGCGCCTAACACCGTCGTTTTCTGTATCCCGCTTTCGGTTAAGGAGCAG
AAATACTGCCCTATCTGTAAATTATGCCCATGGAAGCCGAGCCGCGCCTCATTCCTATATGCAAATTAGCTGCTCCAGTG
CCGAAAGCTCTGCCCCATTTGTAGTTGCGTCTGCTGTCCAGCCCCCAGTGCAAACGAGGCGTCGGTCCCGGAAGCTGTGT
TTTGCGGGTGGCCGCTCGCGCCTGCGCAGTAGAGGCGGCCCAGGCCCGCCTTCCCCAGGGTGTCGCCTCTGTGCTGCCAG
CGGTGCCCCGCCTGCTGCGGTGGCCCCAGCCAGGGGGCGGAGTGGAAGTGGCCGTGGGGCGGGTATGGGACTAGCTGGCG
TGTGCGCCCTGAGACGCTCAGCGGGCTATATACTCGTCGGTGGGGCCGGCGGTCAGTTTCTGGCAGCGGCAGCGGCAGCA
AGACGGTGCAGTGAAGGAGGGTGGGCGTCTGGCGGGGTCCGCAGTTTCAGCAGAGCCGCTGCAGCCATGGCCCCGATCAA
GGTGGGAGATGCCATCCCAGCAGTGGAGGTGTTTGAAGGGGAGCCAGGGAACAAGGTGAACCTGGCAGAGCTGTTCAAGG
GCAAGAAGGGTGTGCTGTTTGGAGTTCCCGGGGCCTTCACCCCTGGATGTTCCAAGACCCACCTGCCAGGGTTTGTGGAG
CAGGCCGAGGCTCTGAAGGCCAAGGGAGTCCAGGTGGTGGCCTGTCTGAGTGTTAATGATGCCTTTGTGACTGGCGAGTG
GGGCCGAGCCCACAAGGCGGAAGGCAAGGTTCGGCTCCTGGCTGATCCCACTGGGGCCTTTGGGAAGGAGACAGACTTAT
TACTAGATGATTCGCTGGTGTCCATCTTTGGGAATCGACGTCTCAAGAGGTTCTCCATGGTGGTACAGGATGGCATAGTG
AAGGCCCTGAATGTGGAACCAGATGGCACAGGCCTCACCTGCAGCCTGGCACCCAATATCATCTCACAGCTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 112 .46 RPM
SRP007412_cerebellum 99 .10 RPM
SRP007412_heart 62 .68 RPM
SRP007412_kidney 125 .69 RPM
SRP007412_liver 54 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017959 ortholog_one2one 1 retrogene
retro_amel_753,
Bos taurus ENSBTAG00000008648 ortholog_one2one 1 retrogene
retro_btau_1364,
Callithrix jacchus ENSCJAG00000018014 ortholog_one2many 1 retrogene
retro_cjac_3013,
Dasypus novemcinctus ENSDNOG00000004647 ortholog_one2one 1 retrogene
retro_dnov_2664,
Equus caballus ENSECAG00000017747 ortholog_one2one 2 retrogenes
retro_ecab_823, retro_ecab_844,
Echinops telfairi ENSETEG00000000264 ortholog_one2one 3 retrogenes
retro_etel_1821, retro_etel_662, retro_etel_740,
Felis catus ENSFCAG00000028856 ortholog_one2many 3 retrogenes
retro_fcat_1189, retro_fcat_410, retro_fcat_727,
Homo sapiens ENSG00000126432 ortholog_one2one 1 retrogene
retro_hsap_408,
Gorilla gorilla ENSGGOG00000001337 ortholog_one2one 1 retrogene
retro_ggor_404,
Loxodonta africana ENSLAFG00000025661 ortholog_one2one 2 retrogenes
retro_lafr_132, retro_lafr_250,
Macaca mulatta ENSMMUG00000013397 ortholog_one2one 1 retrogene
retro_mmul_504,
Mustela putorius furo ENSMPUG00000012907 ortholog_one2one 1 retrogene
retro_mputfur_1360,
Nomascus leucogenys ENSNLEG00000005003 ortholog_one2one 2 retrogenes
retro_nleu_1007, retro_nleu_2228,
Procavia capensis ENSPCAG00000010811 ortholog_one2one 1 retrogene
retro_pcap_144,
Pan troglodytes ENSPTRG00000003835 ortholog_one2one 1 retrogene
retro_ptro_313,
Sus scrofa ENSSSCG00000013030 ortholog_one2one 2 retrogenes
retro_sscr_1041, retro_sscr_888,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_310 53.41 50.29
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Download FASTA sequences of all ENSPPYG00000003106 retrocopies