Parental gene: | OLA1, ENSPPYG00000012943 |
| Aliases: | None |
| Description: | obg-like ATPase 1 [Source:RefSeq peptide;Acc:NP_001127505] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 2b:64158550..64335697(-) |
>ENSPPYG00000012943
ATGCCCCCTAAAAAGGGAGGTGATGGAATTAAACCACCCCCAATCATTGGAAGATTTGGAACCTCACTGAAAATTGGTAT
TGTTGGATTGCCAAATGTTGGGAAATCTACTTTCTTCAATGTACTAACCAATAGTCAGGCTTCAGCAGAAAACTTCCCAT
TCTGCACTATTGATCCTAATGAGAGCAGAGTACCTGTGCCAGATGAAAGGTTTGACTTTCTTTGTCAATACCACAAACCA
GCAAGCAAAATTCCTGCCTTTCTAAATGTGGTGGATATTGCTGGCCTTGTGAAAGGAGCTCACAATGGGCAGGGCCTGGG
GAATGCTTTTTTATCTCATATTAGTGCCTGTGATGGCATCTTTCATCTAACACGTGCTTTTGAAGATGATGATATCACGC
ATGTTGAAGGAAGTGTAGATCCTATTCGAGATATAGAAATAATACATGAAGAGCTTCAGCTTAAAGATGAGGAAATGATT
GGGCCCATTATAGATAAACTAGAAAAGGTGGCTGTGAGAGGAGGAGATAAAAAACTAAAACCTGAATATGATATAATGTG
CAAAGTAAAATCCTGGGTTATAGATCAAAAGAAACCTGTTCGCTTCTATCATGATTGGAATGACAAAGAGATTGAAGTGT
TGAATAAACACTTATTTTTGACTTCAAAACCAATGGTCTACTTGGTTAATCTTTCTGAAAAAGACTACATTAGAAAGAAA
AACAAATGGTTGATAAAAATTAAAGAGTGGGTGGACAAGTATGACCCAGGTGCTTTGGTCATTCCTTTTAGTGGGGCCTT
GGAACTCAAGTTGCAAGAATTGAGTGCTGAGGAGAGACAGAAGTATCTGGAAGCGAACATGACACAAAGTGCTTTGCCAA
AGATCATTAAGGCTGGGTTTGCAGCACTCCAACTAGAATACTTTTTCACTGCAGGCCCAGAGGAAGTGCGTGCATGGACC
ATCAGGAAAGGGACTAAGGCTCCTCAGGCTGCAGGAAAGATTCACACAGATTTTGAAAAGGGATTCATTATGGCTGAAGT
AATGAAATATGAAGATTTTAAAGAGGAAGGTTCTGAAAATGCAGTCAAGGCTGCTGGAAAGTACAGACAACAAGGCAGAA
ATTATATTGTTGAAGATGGAGATATTATCTTCTTCAAATTTAACACACCTCAACAACCAAAGAAGAAATAA
ATGCCCCCTAAAAAGGGAGGTGATGGAATTAAACCACCCCCAATCATTGGAAGATTTGGAACCTCACTGAAAATTGGTAT
TGTTGGATTGCCAAATGTTGGGAAATCTACTTTCTTCAATGTACTAACCAATAGTCAGGCTTCAGCAGAAAACTTCCCAT
TCTGCACTATTGATCCTAATGAGAGCAGAGTACCTGTGCCAGATGAAAGGTTTGACTTTCTTTGTCAATACCACAAACCA
GCAAGCAAAATTCCTGCCTTTCTAAATGTGGTGGATATTGCTGGCCTTGTGAAAGGAGCTCACAATGGGCAGGGCCTGGG
GAATGCTTTTTTATCTCATATTAGTGCCTGTGATGGCATCTTTCATCTAACACGTGCTTTTGAAGATGATGATATCACGC
ATGTTGAAGGAAGTGTAGATCCTATTCGAGATATAGAAATAATACATGAAGAGCTTCAGCTTAAAGATGAGGAAATGATT
GGGCCCATTATAGATAAACTAGAAAAGGTGGCTGTGAGAGGAGGAGATAAAAAACTAAAACCTGAATATGATATAATGTG
CAAAGTAAAATCCTGGGTTATAGATCAAAAGAAACCTGTTCGCTTCTATCATGATTGGAATGACAAAGAGATTGAAGTGT
TGAATAAACACTTATTTTTGACTTCAAAACCAATGGTCTACTTGGTTAATCTTTCTGAAAAAGACTACATTAGAAAGAAA
AACAAATGGTTGATAAAAATTAAAGAGTGGGTGGACAAGTATGACCCAGGTGCTTTGGTCATTCCTTTTAGTGGGGCCTT
GGAACTCAAGTTGCAAGAATTGAGTGCTGAGGAGAGACAGAAGTATCTGGAAGCGAACATGACACAAAGTGCTTTGCCAA
AGATCATTAAGGCTGGGTTTGCAGCACTCCAACTAGAATACTTTTTCACTGCAGGCCCAGAGGAAGTGCGTGCATGGACC
ATCAGGAAAGGGACTAAGGCTCCTCAGGCTGCAGGAAAGATTCACACAGATTTTGAAAAGGGATTCATTATGGCTGAAGT
AATGAAATATGAAGATTTTAAAGAGGAAGGTTCTGAAAATGCAGTCAAGGCTGCTGGAAAGTACAGACAACAAGGCAGAA
ATTATATTGTTGAAGATGGAGATATTATCTTCTTCAAATTTAACACACCTCAACAACCAAAGAAGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 44 .12 RPM |
| SRP007412_cerebellum | 42 .80 RPM |
| SRP007412_heart | 20 .32 RPM |
| SRP007412_kidney | 32 .52 RPM |
| SRP007412_liver | 20 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000006970 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005044 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007877 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000008681 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000138430 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000022215 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000025196 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009296 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005817 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016557 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012650 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000010743 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000005517 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000009660 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_928 | 68.37 | 53.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1912 | 92.41 | 59.34 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000012943 retrocopies