Parental gene:

NME1, ENSPTRG00000009415

Aliases:None
Description:Pan troglodytes NME/NM23 nucleoside diphosphate kinase 1 (NME1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001204512]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:49749936..49759007(+)


>ENSPTRG00000009415
ATGGCCAACTGTGAGCGTACCTTCATTGCGATCAAACCAGATGGGGTCCAGCGGGGTCTTGTGGGAGAGATTATCAAGCG
TTTTGAGCAGAAAGGATTCCGCCTTGTTGGTCTGAAATTCATGCAAGCTTCCGAAGATCTTCTCAAGGAACACTACGTTG
ACCTGAAGGACCGTCCATTCTTTGCCGGCCTGGTGAAATACATGCACTCAGGGCCCGTAGTTGCCATGGTCTGGGAGGGG
CTGAATGTGGTGAAGACGGGCCGAGTCATGCTCGGGGAGACCAACCCTGCAGACTCCAAGCCTGGGACCATCCGTGGAGA
CTTCTGCATACAAGTTGGCAGGAACATTATACATGGCAGTGATTCTGTGGAGAGTGCAGAGAAGGAGATCGGCTTGTGGT
TTCACCCTGAGGAACTGGTAGATTACATGAGCTGTGCTCAGAACTGGATCTATGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 63 .54 RPM
SRP007412_cerebellum 44 .74 RPM
SRP007412_heart 9 .44 RPM
SRP007412_kidney 20 .53 RPM
SRP007412_liver 43 .18 RPM
SRP007412_testis 17 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004651 ortholog_one2one 1 retrogene
retro_btau_1707,
Canis familiaris ENSCAFG00000023628 ortholog_one2many 7 retrogenes
retro_cfam_117, retro_cfam_1645, retro_cfam_37, retro_cfam_676, retro_cfam_69, retro_cfam_832, retro_cfam_96,
Gorilla gorilla ENSGGOG00000016526 ortholog_one2one 1 retrogene
retro_ggor_71,
Monodelphis domestica ENSMODG00000028492 ortholog_one2one 1 retrogene
retro_mdom_503,
Mustela putorius furo ENSMPUG00000015559 ortholog_one2one 5 retrogenes
retro_mputfur_1093, retro_mputfur_1357, retro_mputfur_442, retro_mputfur_667, retro_mputfur_997,
Mus musculus ENSMUSG00000091228 possible_ortholog 3 retrogenes
retro_mmus_2712, retro_mmus_3081, retro_mmus_581,
Nomascus leucogenys ENSNLEG00000007919 ortholog_one2one 2 retrogenes
retro_nleu_1029, retro_nleu_1030,
Oryctolagus cuniculus ENSOCUG00000022135 ortholog_one2one 1 retrogene
retro_ocun_1728,
Pan troglodytes ENSPTRG00000007541 within_species_paralog 1 retrogene
retro_ptro_1220,
Rattus norvegicus ENSRNOG00000002693 ortholog_one2one 3 retrogenes
retro_rnor_1198, retro_rnor_1600, retro_rnor_704,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_91 82.12 99.34
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Download FASTA sequences of all ENSPTRG00000009415 retrocopies