Parental gene:

HMGN3, ENSPTRG00000018366

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:79646070..79679934(-)


>ENSPTRG00000018366
ATGCCGAAGAGAAAGTCTCCAGAGAATACAGAGGGCAAAGATGGATCCAAAGTAACTAAACAGGAGCCCACAAGACGGTC
TGCCAGATTGTCAGCGAAACCTGCTCCACCAAAACCTGAACCCAAACCAAGAAAAACATCTGCTAAGAAAGAACCTGGAG
CAAAGATTAGCAGAGGTGCTAAAGGGAAGAAGGAGGAAAAGCAGGAAGCTGGAAAGGAAGGTACTGCACCATCTGAAAAT
GGTGAAACTAAAGCTGAAGAGGCACAGAAAACTGAATCTGTAGATAACGAGGGAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 25 .33 RPM
SRP007412_cerebellum 29 .43 RPM
SRP007412_heart 96 .44 RPM
SRP007412_kidney 63 .91 RPM
SRP007412_liver 29 .46 RPM
SRP007412_testis 20 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007015 ortholog_one2one 1 retrogene
retro_chof_2241,
Cavia porcellus ENSCPOG00000012407 ortholog_one2one 2 retrogenes
retro_cpor_1399, retro_cpor_147,
Felis catus ENSFCAG00000028793 ortholog_one2one 1 retrogene
retro_fcat_1400,
Homo sapiens ENSG00000118418 ortholog_one2one 1 retrogene
retro_hsap_231,
Gorilla gorilla ENSGGOG00000006910 ortholog_one2one 1 retrogene
retro_ggor_293,
Macaca mulatta ENSMMUG00000004351 ortholog_one2one 1 retrogene
retro_mmul_414,
Nomascus leucogenys ENSNLEG00000012377 ortholog_one2one 2 retrogenes
retro_nleu_68, retro_nleu_851,
Otolemur garnettii ENSOGAG00000016487 possible_ortholog 1 retrogene
retro_ogar_190,
Ochotona princeps ENSOPRG00000009611 ortholog_one2one 1 retrogene
retro_opri_799,
Ictidomys tridecemlineatus ENSSTOG00000014353 ortholog_one2one 1 retrogene
retro_itri_251,
Tupaia belangeri ENSTBEG00000015468 ortholog_one2one 3 retrogenes
retro_tbel_1912, retro_tbel_4714, retro_tbel_615,
Tarsius syrichta ENSTSYG00000005238 ortholog_one2one 3 retrogenes
retro_tsyr_1569, retro_tsyr_268, retro_tsyr_976,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_200 69.00 100.00
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2. retro_ptro_1427 56.79 80.81
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Download FASTA sequences of all ENSPTRG00000018366 retrocopies