Parental gene:

ATP6V1G1, ENSPTRG00000021290

Aliases:None
Description:ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1; V-type proton ATPase subunit G 1 [Source:UniProtKB/TrEMBL;Acc:H2QXR5]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:9:113525525..113537877(+)


>ENSPTRG00000021290
ATGGCTAGTCAGTCTCAGGGGATTCAGCAGCTGCTGCAGGCCGAGAAGCGGGCAGCCGAGAAGGTGTCCGAGGCCCGCAA
AAGAAAGAACCGGAGGCTGAAGCAGGCCAAAGAAGAAGCTCAGGCTGAAATTGAACAGTACCGCCTGCAGAGGGAGAAAG
AATTCAAGGCCAAGGAAGCTGCGGCACTGGGATCCCGTGGCAGTTGCAGCACTGAAGTGGAGAAGGAGACCCAGGAGAAG
ATGACCATCCTCCAGACATACTTCCGGCAGAACAGGGATGAAGTCTTGGACAACCTCTTGGCTTTTGTCTGTGACATTCG
GCCAGAAATCCATGAAAACTACCGCATAAATGGATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .10 RPM
SRP007412_cerebellum 37 .68 RPM
SRP007412_heart 23 .99 RPM
SRP007412_kidney 68 .75 RPM
SRP007412_liver 40 .23 RPM
SRP007412_testis 52 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020461 ortholog_one2many 3 retrogenes
retro_cjac_1788, retro_cjac_2513, retro_cjac_76,
Dasypus novemcinctus ENSDNOG00000008083 ortholog_one2one 15 retrogenes
retro_dnov_1173, retro_dnov_1447, retro_dnov_1475, retro_dnov_1504, retro_dnov_1588, retro_dnov_1645, retro_dnov_193, retro_dnov_1998, retro_dnov_2179, retro_dnov_218, retro_dnov_2416, retro_dnov_245, retro_dnov_336, retro_dnov_479, retro_dnov_790,
Dipodomys ordii ENSDORG00000014850 ortholog_one2one 5 retrogenes
retro_dord_434, retro_dord_466, retro_dord_614, retro_dord_640, retro_dord_749,
Echinops telfairi ENSETEG00000008080 ortholog_one2one 3 retrogenes
retro_etel_350, retro_etel_594, retro_etel_996,
Homo sapiens ENSG00000136888 ortholog_one2one 3 retrogenes
retro_hsap_3198, retro_hsap_4049, retro_hsap_763,
Gorilla gorilla ENSGGOG00000004011 ortholog_one2one 4 retrogenes
retro_ggor_1331, retro_ggor_2215, retro_ggor_2717, retro_ggor_632,
Loxodonta africana ENSLAFG00000013437 ortholog_one2one 2 retrogenes
retro_lafr_1002, retro_lafr_39,
Myotis lucifugus ENSMLUG00000008657 possible_ortholog 2 retrogenes
retro_mluc_373, retro_mluc_839,
Macaca mulatta ENSMMUG00000004899 ortholog_one2one 4 retrogenes
retro_mmul_1783, retro_mmul_2018, retro_mmul_2046, retro_mmul_331,
Monodelphis domestica ENSMODG00000019574 ortholog_one2one 1 retrogene
retro_mdom_1675,
Mus musculus ENSMUSG00000039105 possible_ortholog 5 retrogenes
retro_mmus_2028, retro_mmus_2784, retro_mmus_2787, retro_mmus_3316, retro_mmus_819,
Nomascus leucogenys ENSNLEG00000016833 ortholog_one2one 2 retrogenes
retro_nleu_1151, retro_nleu_3045,
Ictidomys tridecemlineatus ENSSTOG00000015857 ortholog_one2one 5 retrogenes
retro_itri_1102, retro_itri_1235, retro_itri_1281, retro_itri_1340, retro_itri_1669,
Tupaia belangeri ENSTBEG00000010985 ortholog_one2one 2 retrogenes
retro_tbel_2147, retro_tbel_786,
Tarsius syrichta ENSTSYG00000011474 ortholog_one2one 3 retrogenes
retro_tsyr_1865, retro_tsyr_2141, retro_tsyr_614,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2248 64.15 89.83
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2. retro_ptro_2744 75.51 83.05
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Download FASTA sequences of all ENSPTRG00000021290 retrocopies