Parental gene:

Srsf5, ENSRNOG00000005513

Aliases:None
Description:Serine/arginine-rich splicing factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q09167]
Organism:Rat (Rattus norvegicus)
Coordinates:6:112776229..112780506(+)


>ENSRNOG00000005513
ATGAGTGGCTGTCGAGTGTTCATTGGGAGACTAAATCCCGCAGCGAGGGAGAAAGATGTGGAAAGATTCTTCAAGGGTTA
CGGACGGATCAGAGATATTGATTTGAAAAGAGGTTTTGGTTTTGTGGAATTTGAGGACCCAAGGGATGCAGATGACGCTG
TTTATGAACTTGATGGGAAGGAACTTTGCAGTGAAAGGGTTACTATTGAACATGCTCGGGCTCGGTCTCGAGGTGGAAGA
GGTAGAGGACGATACTCCGACCGTTTTAGCAGTCGCAGACCTCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGA
AAATCGACTTATAGTTGAGAATTTATCCTCAAGAGTCAGCTGGCAGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAG
TAACCTTTGCGGATGCACATCGACCTAAACTAAATGAAGGGGTAGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCT
ATTGAGAAACTTTCTGGAAAGGAAATTAATGGGAGAAAAATCAAATTAATTGAAGGCAGCAAAAGACACAGGTCAAGAAG
CAGGTCACGATCTCGGACCAGGAGTTCCTCTAGGTCCCGTAGCCGATCCCGTTCACGCAGGAGCAAGTCTTACAGCCGAT
CAAGGAGCAGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGGTAGTAGGTCTCCCGTGCCTGAGAAGAGCCAGAAACGTGGT
TCTTCGAGTAGATCTAAATCTCCAGCATCTGTGGATCGCCAGAGGTCCCGATCCCGGTCCAGGTCCAGATCAGTTGACAG
TGGCAATTAA

Library Parental gene expression (RPM)
SRP017611_liver 141 .40 RPM
SRP017611_kidney 192 .39 RPM
SRP017611_brain 172 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Macropus eugenii ENSMEUG00000001521 ortholog_one2one 2 retrogenes
retro_meug_1173, retro_meug_2182,
Monodelphis domestica ENSMODG00000011362 ortholog_one2one 1 retrogene
retro_mdom_934,
Mus musculus ENSMUSG00000021134 ortholog_one2one 1 retrogene
retro_mmus_2396,
Rattus norvegicus ENSRNOG00000000520 other_paralog 11 retrogenes
retro_rnor_1010, retro_rnor_1283, retro_rnor_1321, retro_rnor_1339, retro_rnor_1647, retro_rnor_1697, retro_rnor_1889, retro_rnor_2424, retro_rnor_634, retro_rnor_728, retro_rnor_790,
Rattus norvegicus ENSRNOG00000006380 within_species_paralog 1 retrogene
retro_rnor_1752,
Rattus norvegicus ENSRNOG00000027360 other_paralog 11 retrogenes
retro_rnor_1535, retro_rnor_1977, retro_rnor_1984, retro_rnor_2419, retro_rnor_2420, retro_rnor_2421, retro_rnor_2495, retro_rnor_2501, retro_rnor_2502, retro_rnor_2503, retro_rnor_478,
Tupaia belangeri ENSTBEG00000001972 ortholog_one2one 1 retrogene
retro_tbel_2707,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2900 88.70 85.50
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Download FASTA sequences of all ENSRNOG00000005513 retrocopies