Parental gene:

Rps25, ENSRNOG00000027503

Aliases:None
Description:40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P62853]
Organism:Rat (Rattus norvegicus)
Coordinates:8:47346311..47348692(+)


>ENSRNOG00000027503
ATGCCGCCCAAAGACGACAAGAAGAAGAAGGATGCCGGAAAGTCGGCCAAAAAAGACAAGGACCCAGTAAATAAATCTGG
TGGCAAGGCCAAAAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGACAAGCTGAACAATCTCGTCCTGTTTGACAAAGCTA
CTTACGACAAACTTTGTAAGGAAGTTCCCAACTATAAGCTTATTACTCCAGCTGTGGTCTCCGAGAGACTGAAGATTCGA
GGTTCCTTGGCCAGGGCAGCCCTTCAGGAGCTACTTAGTAAAGGACTTATCAAGCTGGTTTCAAAGCACAGAGCCCAAGT
AATTTACACCAGAAACACAAAGGGTGGAGATGCCCCAGCTGCTGGTGAAGATGCATAA

Library Parental gene expression (RPM)
SRP017611_liver 44 .58 RPM
SRP017611_kidney 72 .64 RPM
SRP017611_brain 48 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000027772 possible_ortholog 2 retrogenes
retro_btau_203, retro_btau_9,
Callithrix jacchus ENSCJAG00000013691 possible_ortholog 1 retrogene
retro_cjac_208,
Dasypus novemcinctus ENSDNOG00000007880 ortholog_one2many 7 retrogenes
retro_dnov_1092, retro_dnov_1566, retro_dnov_2219, retro_dnov_2593, retro_dnov_346, retro_dnov_877, retro_dnov_973,
Latimeria chalumnae ENSLACG00000017531 possible_ortholog 4 retrogenes
retro_lcha_101, retro_lcha_118, retro_lcha_50, retro_lcha_72,
Macropus eugenii ENSMEUG00000014185 possible_ortholog 3 retrogenes
retro_meug_1181, retro_meug_1562, retro_meug_174,
Mus musculus ENSMUSG00000009927 ortholog_one2one 15 retrogenes
retro_mmus_128, retro_mmus_1368, retro_mmus_1455, retro_mmus_1760, retro_mmus_1769, retro_mmus_1788, retro_mmus_2375, retro_mmus_2393, retro_mmus_2641, retro_mmus_2700, retro_mmus_2797, retro_mmus_3218, retro_mmus_336, retro_mmus_3523, retro_mmus_880,
Otolemur garnettii ENSOGAG00000007265 possible_ortholog 3 retrogenes
retro_ogar_220, retro_ogar_257, retro_ogar_32,
Ochotona princeps ENSOPRG00000016194 possible_ortholog 9 retrogenes
retro_opri_1099, retro_opri_1204, retro_opri_256, retro_opri_320, retro_opri_393, retro_opri_493, retro_opri_64, retro_opri_854, retro_opri_873,
Vicugna pacos ENSVPAG00000000266 possible_ortholog 4 retrogenes
retro_vpac_106, retro_vpac_118, retro_vpac_337, retro_vpac_546,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_90 92.00 100.00
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2. retro_rnor_157 95.00 96.00
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3. retro_rnor_893 78.57 100.00
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4. retro_rnor_992 74.60 100.00
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5. retro_rnor_1430 72.80 100.00
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Download FASTA sequences of all ENSRNOG00000027503 retrocopies