Parental gene:

Pgam5, ENSRNOG00000037443

Aliases:Pgam5, RGD1312028
Description:serine/threonine-protein phosphatase PGAM5, mitochondrial [Source:RefSeq peptide;Acc:NP_001020443]
Organism:Rat (Rattus norvegicus)
Coordinates:12:54202824..54210153(+)


>ENSRNOG00000037443
ATGGCTTTCCGGCAGGCTCTTCAGCTGGCGGCCTGTGGTCTGGCGGGTGGCTCGGCCGCTGTTCTCTTCTCGGCGGTAGC
GGTAGGGAAGCCGAGAGCTGGCGGGGATGCAGACACGCGCACGACAGAGCCGCTGGCCTGGACCGGAGCGCGCCCCGGGC
ACGGCGTCTGGGACTCCAACTGGGACAGGCGAGAGCCACTGTCACTCATTAACCTGAAGAAAAGGAACGTGGAATCTGGA
GAAGATGAACTGGCTTCCAGGCTGGACCACTATAAGGCAAAGGCTACAAGACACATATTCCTCATCCGGCATTCCCAGTA
CAATGTGGATGGCTCGATGGAGAAGGACCGCACCCTGACCCCATTAGGTCGGGAACAGGCTGAACTCACGGGGATCCGAC
TTGCAAGCCTGGGACTGAAGTTTAATAAAATCGTCCATTCCTCTATGACCCGTGCAGTAGAGACCACAGACATCATCAGT
AAGCACCTGCCAGGTGTCTGCAGAGTCAGCACAGACTTGCTACGGGAAGGTGCCCCCATTGAACCGGATCCACCTGTGTC
TCACTGGAAGCCAGAGGCTGTGCAGTATTATGAAGATGGAGCCCGGATTGAGGCTGCCTTCAGGAACTACATCCACCGAG
CTGATGCCAAGCAGGAGGAGGACAGCTACGAGATCTTCATATGTCACGCCAATGTCATCCGTTATATTGTTTGTAGGGCA
CTGCAGTTTCCCCCAGAAGGTTGGCTCCGCCTGTCCCTCAACAATGGTAGTATCACCCACCTGGTGATTCGACCCAATGG
TCGTGTTGCACTCAGGACCCTTGGGGACACAGGGTTCATGCCCCCAGACAAGATTACTCGGTCCTGA

Library Parental gene expression (RPM)
SRP017611_liver 10 .56 RPM
SRP017611_kidney 22 .89 RPM
SRP017611_brain 23 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013437 ortholog_one2one 2 retrogenes
retro_amel_1052, retro_amel_173,
Choloepus hoffmanni ENSCHOG00000011867 ortholog_one2one 2 retrogenes
retro_chof_1762, retro_chof_2590,
Felis catus ENSFCAG00000002503 ortholog_one2many 2 retrogenes
retro_fcat_800, retro_fcat_960,
Homo sapiens ENSG00000247077 ortholog_one2one 1 retrogene
retro_hsap_3363,
Myotis lucifugus ENSMLUG00000013646 ortholog_one2one 1 retrogene
retro_mluc_1270,
Macaca mulatta ENSMMUG00000015466 ortholog_one2one 1 retrogene
retro_mmul_2101,
Mustela putorius furo ENSMPUG00000002639 ortholog_one2one 1 retrogene
retro_mputfur_684,
Pan troglodytes ENSPTRG00000005657 ortholog_one2one 1 retrogene
retro_ptro_2286,
Sus scrofa ENSSSCG00000026764 ortholog_one2one 1 retrogene
retro_sscr_821,
Tursiops truncatus ENSTTRG00000010653 ortholog_one2one 1 retrogene
retro_ttru_208,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1597 86.11 62.50
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Download FASTA sequences of all ENSRNOG00000037443 retrocopies