Parental gene:

EIF5A, ENSSSCG00000017939

Aliases:None
Description:eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:3300]
Organism:Pig (Sus scrofa)
Coordinates:3:139935129..139940520(+)


>ENSSSCG00000017939
ATGGCAGATGATTTGGACTTCGAGACAGGAGATGCAGGGGCCTCAGCCACCTTCCCGATGCAGTGCTCAGCGTTACGTAA
GAATGGCTTTGTGGTGCTCAAAGGCCGGCCATGTAAGATTGTGGAGATGTCTACCTCCAAGACTGGCAAGCACGGCCACG
CCAAGGTCCATCTGGTTGGTATTGACATCTTTACTGGGAAGAAATATGAAGATATCTGCCCGTCAACTCATAATATGGAT
GTCCCCAACATCAAAAGGAATGATTTCCAGCTGATTGGCATCCAGGATGGGTATCTATCGCTGCTCCAAGACAGCGGGGA
GGTGCGAGAGGACCTTCGTCTGCCTGAGGGAGACCTCGGCAAGGAGATTGAGCAGAAGTACGACTGTGGAGAAGAGATCC
TGATCACGGTGCTGTCTGCCATGACAGAGGAGGCAGCTGTTGCAATCAAGGCCATGGCAAAATAA

Library Parental gene expression (RPM)
SRP014902_placenta 498 .80 RPM
SRP014902_testis 382 .90 RPM
SRP018856_adipose 293 .88 RPM
SRP018288_kidney 259 .76 RPM
SRP018288_lung 290 .00 RPM
SRP018288_liver 374 .67 RPM
SRP018288_heart 108 .49 RPM
SRP035408_liver 185 .50 RPM
SRP035408_brain 153 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000132507 ortholog_one2one 3 retrogenes
retro_hsap_1788, retro_hsap_2004, retro_hsap_9,
Gorilla gorilla ENSGGOG00000012032 ortholog_one2one 2 retrogenes
retro_ggor_1448, retro_ggor_159,
Monodelphis domestica ENSMODG00000006652 ortholog_one2one 2 retrogenes
retro_mdom_1641, retro_mdom_190,
Otolemur garnettii ENSOGAG00000014230 ortholog_one2one 1 retrogene
retro_ogar_2414,
Pan troglodytes ENSPTRG00000008674 ortholog_one2one 3 retrogenes
retro_ptro_1198, retro_ptro_442, retro_ptro_504,
Tursiops truncatus ENSTTRG00000009783 ortholog_one2one 1 retrogene
retro_ttru_1526,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1204 76.62 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000017939 retrocopies