Parental gene:

HSPA8, ENSSTOG00000003756

Aliases:None
Description:heat shock 70kDa protein 8 [Source:HGNC Symbol;Acc:5241]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393352.1:7577401..7580766(-)


>ENSSTOG00000003756
ATGTCTAAGGGACCTGCAGTTGGCATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAAGTGGA
GATAATTGCCAATGATCAGGGGAACCGAACTACCCCAAGCTATGTCGCCTTTACTGACACAGAACGATTGATCGGCGATG
CTGCAAAGAATCAGGTTGCGATGAACCCCACCAACACGGTTTTTGATGCCAAACGTCTGATAGGGCGAAGGTTTGATGAT
GCTGTTGTGCAGTCTGATATGAAGCACTGGCCCTTTATGGTGGTGAATGATGCAGGCAGGCCCAAAGTCCAAGTAGAATA
CAAGGGAGAGACAAAAAGTTTCTATCCAGAAGAGGTATCATCTATGGTTCTGACAAAGATGAAGGAAATTGCAGAAGCCT
ACCTTGGGAAGACCGTTACCAATGCTGTGGTCACAGTGCCAGCTTACTTCAATGATTCTCAGCGTCAGGCAACCAAAGAT
GCCGGAACCATTGCTGGTCTCAATGTACTTAGGATAATCAATGAGCCAACTGCTGCTGCTATTGCTTACGGTTTGGACAA
GAAGGTTGGAGCTGAAAGAAATGTGCTGATTTTTGATTTAGGAGGTGGCACTTTTGATGTGTCAATCCTCACTATTGAGG
ATGGAATCTTTGAGGTCAAATCTACAGCTGGAGACACCCACTTAGGTGGAGAAGACTTTGACAACAGAATGGTCAATCAT
TTTATCGCAGAGTTCAAGCGCAAGCATAAGAAGGACATCAGTGAGAACAAAAGAGCTGTCCGACGTCTCCGTACTGCATG
TGAAAGAGCTAAGCGTACCCTCTCTTCCAGCACTCAGGCCAGTATTGAGATTGATTCTCTCTATGAAGGAATCGACTTCT
ATACCTCCATTACCCGTGCTCGATTTGAAGAGTTGAATGCTGACCTGTTCCGTGGCACCCTCGACCCTGTAGAAAAAGCT
CTTCGAGATGCCAAACTAGACAAGTCACAGATCCATGATATTGTACTGGTGGGTGGTTCTACTCGTATCCCCAAGATTCA
GAAGCTTCTGCAGGACTTCTTCAATGGAAAGGAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAG
CTGTCCAGGCAGCCATTTTGTCTGGAGACAAGTCTGAAAACGTTCAAGATTTGCTGCTGTTGGATGTCACTCCTCTTTCC
CTTGGTATTGAAACTGCTGGTGGAGTCATGACTGTCCTCATCAAGCGCAATACCACCATTCCTACCAAGCAGACACAGAC
CTTCACAACTTACTCTGACAACCAGCCTGGTGTGCTCATTCAGGTATATGAAGGTGAGCGTGCCATGACCAAGGATAACA
ACCTACTTGGCAAGTTTGAACTCACAGGCATACCCCCTGCACCCCGTGGTGTTCCTCAGATTGAAGTCACATTTGATATT
GATGCCAATGGCATCCTGAATGTTTCTGCTGTAGACAAGAGTACAGGAAAAGAAAACAAGATTACCATCACTAACGACAA
AGGTCGTTTGAGCAAGGAAGACATTGAGCGCATGGTCCAGGAAGCTGAGAAGTACAAAGCTGAAGATGAAAAGCAGAGGG
ACAAGGTGTCATCCAAGAATTCGCTCGAGTCCTATGCATTCAACATGAAAGCAACTGTTGAAGATGAGAAACTTCAAGGA
AAGATAAATGATGAGGACAAACAGAAGATTCTTGACAAATGTAATGAAATCATCAACTGGCTGGATAAGAACCAGACTGC
AGAGAAGGAAGAATTTGAACATCAGCAGAAAGAGCTGGAGAAAGTCTGCAACCCCATCATTACCAAGCTGTACCAGAGTG
CAGGAGGCATGCCAGGAGGAATGCCTGGGGGATTCCCTGGTGGGGGAGCTCCTCCCTCTGGTGGTGCTTCCTCTGGGCCC
ACCATTGAAGAAGTTGATTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004884 ortholog_one2one 2 retrogenes
retro_acar_21, retro_acar_6,
Anas platyrhynchos ENSAPLG00000010667 ortholog_one2one 1 retrogene
retro_apla_6,
Canis familiaris ENSCAFG00000011666 ortholog_one2one 3 retrogenes
retro_cfam_140, retro_cfam_191, retro_cfam_509,
Ciona intestinalis ENSCING00000009665 ortholog_one2many 1 retrogene
retro_cint_12,
Cavia porcellus ENSCPOG00000004169 possible_ortholog 3 retrogenes
retro_cpor_1072, retro_cpor_619, retro_cpor_938,
Ciona savignyi ENSCSAVG00000008588 ortholog_many2many 1 retrogene
retro_csav_3,
Equus caballus ENSECAG00000013510 ortholog_one2one 2 retrogenes
retro_ecab_291, retro_ecab_628,
Echinops telfairi ENSETEG00000010996 ortholog_one2one 1 retrogene
retro_etel_43,
Ficedula albicollis ENSFALG00000005812 ortholog_one2one 1 retrogene
retro_falb_18,
Gallus gallus ENSGALG00000006512 ortholog_one2one 1 retrogene
retro_ggal_8,
Loxodonta africana ENSLAFG00000030312 ortholog_one2one 4 retrogenes
retro_lafr_1218, retro_lafr_391, retro_lafr_790, retro_lafr_797,
Meleagris gallopavo ENSMGAG00000001929 ortholog_one2one 1 retrogene
retro_mgal_9,
Myotis lucifugus ENSMLUG00000004834 possible_ortholog 3 retrogenes
retro_mluc_1800, retro_mluc_2300, retro_mluc_777,
Monodelphis domestica ENSMODG00000012958 ortholog_one2many 2 retrogenes
retro_mdom_127, retro_mdom_99,
Mustela putorius furo ENSMPUG00000005810 ortholog_one2many 9 retrogenes
retro_mputfur_1048, retro_mputfur_1056, retro_mputfur_1144, retro_mputfur_131, retro_mputfur_188, retro_mputfur_309, retro_mputfur_627, retro_mputfur_694, retro_mputfur_958,
Nomascus leucogenys ENSNLEG00000007419 ortholog_one2one 8 retrogenes
retro_nleu_119, retro_nleu_1258, retro_nleu_1261, retro_nleu_1582, retro_nleu_175, retro_nleu_1781, retro_nleu_370, retro_nleu_64,
Oreochromis niloticus ENSONIG00000004759 ortholog_one2many 1 retrogene
retro_onil_2,
Pelodiscus sinensis ENSPSIG00000012450 ortholog_one2one 2 retrogenes
retro_psin_17, retro_psin_5,
Ictidomys tridecemlineatus ENSSTOG00000011243 within_species_paralog 4 retrogenes
retro_itri_1686, retro_itri_1687, retro_itri_1689, retro_itri_1879,
Taeniopygia guttata ENSTGUG00000000491 ortholog_one2one 1 retrogene
retro_tgut_7,
Takifugu rubripes ENSTRUG00000005265 ortholog_one2one 1 retrogene
retro_trub_30,
Xiphophorus maculatus ENSXMAG00000001602 ortholog_one2many 1 retrogene
retro_xmac_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_51 86.72 96.44
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Download FASTA sequences of all ENSSTOG00000003756 retrocopies