Parental gene: | HSPA5, ENSSTOG00000011243 |
| Aliases: | None |
| Description: | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:HGNC Symbol;Acc:5238] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393297.1:13348409..13352481(-) |
>ENSSTOG00000011243
ATGAAGCTCTCTCTGGTGGCCGCGGTGCTGCTGCTGCTCTGCGCGGCGCGGGCCGAGGAGGAGGACAAGAAGGAGGATGT
GGGTACCGTGGTCGGCATCGACCTGGGGACCACTTACTCTTGCGTCGGGGTGTTCAAGAATGGCCGCGTGGAGATCATCG
CCAACGATCAGGGCAACCGCATCACGCCGTCTTATGTGGCCTTCACCCCAGAAGGGGAACGTCTGATTGGCGATGCGGCC
AAGAATCAGCTCACCTCCAATCCTGAGAACACGGTCTTCGACGCCAAGCGGCTCATCGGCCGCACTTGGAATGACCCGTC
CGTGCAGCAAGACATCAAGTTCTTGCCTTTCAAGGTGGTTGAAAAGAAAACTAAACCATACATTCAGGTTGATATTGGAG
GTGGGCAAACTAAGACATTTGCTCCAGAAGAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGACTGCTGAGGCTTAT
TTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACCAAAGATGC
TGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAAGA
GGGAGGGAGAGAAGAACATCCTAGTGTTTGATTTGGGTGGTGGAACCTTCGATGTGTCTCTTCTCACCATTGACAATGGT
GTCTTCGAAGTCGTGGCCACTAATGGAGATACTCATCTGGGTGGAGAAGACTTTGACCAGCGTGTTATGGAACACTTCAT
CAAGCTGTACAAAAAGAAGACTGGCAAAGATGTTAGGAAAGACAACAGAGCTGTGCAGAAACTCCGGCGTGAAGTAGAAA
AGGCCAAGCGGGCCCTGTCTTCTCAACATCAAGCAAGAATTGAAATTGAGTCCTTCTATGAAGGAGAAGACTTTTCTGAA
ACCCTGACTCGGGCCAAATTTGAAGAGCTAAACATGGACCTGTTCCGGTCTACCATGAAGCCTGTTCAGAAAGTACTGGA
GGATTCTGACTTGAAGAAGTCTGATATTGATGAGATTGTTCTTGTTGGTGGCTCTACTCGAATTCCAAAGATTCAGCAAC
TTGTTAAAGAGTTCTTCAATGGCAAGGAGCCATCCCGTGGCATAAACCCAGATGAGGCTGTTGCATATGGTGCTGCCGTC
CAGGCTGGTGTACTCTCTGGTGATCAAGATACAGGTGACCTAGTACTGCTTGATGTATGTCCCCTGACACTTGGTATTGA
AACTGTGGGAGGTGTCATGACCAAACTGATACCAAGGAACACTGTGGTACCCACCAAGAAGTCTCAGATCTTTTCTACAG
CTTCTGATAATCAACCTACTGTTACAATCAAGGTCTATGAAGGTGAACGACCCCTGACAAAAGACAACCACCTTCTGGGT
ACATTTGATCTCACTGGAATTCCTCCTGCTCCCCGTGGGGTCCCCCAGATTGAAGTCACTTTTGAGATAGATGTGAATGG
TATTCTTCGGGTGACAGCTGAAGATAAGGGTACAGGGAACAAAAATAAGATCACAATTACCAATGATCAAAATCGCCTGA
CACCTGAAGAAATTGAAAGGATGGTAAATGATGCTGAGAAGTTTGCTGAGGAAGACAAAAGACTCAAGGAGCGCATTGAT
ACCAGGAATGAGTTGGAAAGCTATGCCTATTCTCTAAAGAATCAGATTGGAGATAAAGAAAAGTTGGGAGGCAAACTTTC
CTCTGAAGATAAGGAGACCATGGAAAAAGCTGTAGAGGAAAAAATTGAATGGCTGGAAAGCCACCAAGATGCTGACATTG
AAGACTTCAAAGCTAAAAAGAAGGAACTAGAAGAAATTGTTCAGCCAATTATCAGCAAACTCTATGGAAGTGCAGGCCCT
CCCCCAACTGGTGAAGAGGATACATCAGAAAGAGACGAGTTGTAG
ATGAAGCTCTCTCTGGTGGCCGCGGTGCTGCTGCTGCTCTGCGCGGCGCGGGCCGAGGAGGAGGACAAGAAGGAGGATGT
GGGTACCGTGGTCGGCATCGACCTGGGGACCACTTACTCTTGCGTCGGGGTGTTCAAGAATGGCCGCGTGGAGATCATCG
CCAACGATCAGGGCAACCGCATCACGCCGTCTTATGTGGCCTTCACCCCAGAAGGGGAACGTCTGATTGGCGATGCGGCC
AAGAATCAGCTCACCTCCAATCCTGAGAACACGGTCTTCGACGCCAAGCGGCTCATCGGCCGCACTTGGAATGACCCGTC
CGTGCAGCAAGACATCAAGTTCTTGCCTTTCAAGGTGGTTGAAAAGAAAACTAAACCATACATTCAGGTTGATATTGGAG
GTGGGCAAACTAAGACATTTGCTCCAGAAGAAATTTCTGCTATGGTTCTCACTAAAATGAAAGAGACTGCTGAGGCTTAT
TTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAGCGGCAAGCAACCAAAGATGC
TGGAACTATTGCTGGCCTGAATGTTATGAGGATCATCAATGAGCCTACAGCAGCTGCTATTGCTTATGGCCTGGATAAGA
GGGAGGGAGAGAAGAACATCCTAGTGTTTGATTTGGGTGGTGGAACCTTCGATGTGTCTCTTCTCACCATTGACAATGGT
GTCTTCGAAGTCGTGGCCACTAATGGAGATACTCATCTGGGTGGAGAAGACTTTGACCAGCGTGTTATGGAACACTTCAT
CAAGCTGTACAAAAAGAAGACTGGCAAAGATGTTAGGAAAGACAACAGAGCTGTGCAGAAACTCCGGCGTGAAGTAGAAA
AGGCCAAGCGGGCCCTGTCTTCTCAACATCAAGCAAGAATTGAAATTGAGTCCTTCTATGAAGGAGAAGACTTTTCTGAA
ACCCTGACTCGGGCCAAATTTGAAGAGCTAAACATGGACCTGTTCCGGTCTACCATGAAGCCTGTTCAGAAAGTACTGGA
GGATTCTGACTTGAAGAAGTCTGATATTGATGAGATTGTTCTTGTTGGTGGCTCTACTCGAATTCCAAAGATTCAGCAAC
TTGTTAAAGAGTTCTTCAATGGCAAGGAGCCATCCCGTGGCATAAACCCAGATGAGGCTGTTGCATATGGTGCTGCCGTC
CAGGCTGGTGTACTCTCTGGTGATCAAGATACAGGTGACCTAGTACTGCTTGATGTATGTCCCCTGACACTTGGTATTGA
AACTGTGGGAGGTGTCATGACCAAACTGATACCAAGGAACACTGTGGTACCCACCAAGAAGTCTCAGATCTTTTCTACAG
CTTCTGATAATCAACCTACTGTTACAATCAAGGTCTATGAAGGTGAACGACCCCTGACAAAAGACAACCACCTTCTGGGT
ACATTTGATCTCACTGGAATTCCTCCTGCTCCCCGTGGGGTCCCCCAGATTGAAGTCACTTTTGAGATAGATGTGAATGG
TATTCTTCGGGTGACAGCTGAAGATAAGGGTACAGGGAACAAAAATAAGATCACAATTACCAATGATCAAAATCGCCTGA
CACCTGAAGAAATTGAAAGGATGGTAAATGATGCTGAGAAGTTTGCTGAGGAAGACAAAAGACTCAAGGAGCGCATTGAT
ACCAGGAATGAGTTGGAAAGCTATGCCTATTCTCTAAAGAATCAGATTGGAGATAAAGAAAAGTTGGGAGGCAAACTTTC
CTCTGAAGATAAGGAGACCATGGAAAAAGCTGTAGAGGAAAAAATTGAATGGCTGGAAAGCCACCAAGATGCTGACATTG
AAGACTTCAAAGCTAAAAAGAAGGAACTAGAAGAAATTGTTCAGCCAATTATCAGCAAACTCTATGGAAGTGCAGGCCCT
CCCCCAACTGGTGAAGAGGATACATCAGAAAGAGACGAGTTGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006880 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000044574 | ortholog_one2one | 1 retrogene | |
| Gallus gallus | ENSGALG00000001000 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026879 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016702 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026864 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017348 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006786 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019609 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000563 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003756 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_1686 | 76.92 | 63.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1687 | 75.90 | 54.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1689 | 78.47 | 63.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_1879 | 77.51 | 63.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000011243 retrocopies