Parental gene: | TPRKB, ENSSTOG00000016406 |
| Aliases: | None |
| Description: | TP53RK binding protein [Source:HGNC Symbol;Acc:24259] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393301.1:17493953..17498978(-) |
>ENSSTOG00000016406
ATGCAGTTAACATATCAGCTGGACTTATTTCCTGAATGCACAGTGACTCTTCTCTTATTTAAAGATGTAAAAAATGCTGG
AGACTTGAGAAAAAAGGCCATGGAAGGCACCATTGATGGTGCATTGATAAATCCTTCAGTGATTGTTGATCCTTTTCAGA
TACTTGTGGCAGCAAATAAAGCAGTTCACCTCTACAAACTGGGAAAAATGAAGACGAGAACTCTATCTACTGAAATTATT
TTCAACCTTTCCCCAAACAACAATATTTCAGAGGCTTTGAAAAAATTTGGTATCTCAGCAGATAATACTTCAATTTTAAT
TGTTTACGTTGAAGAGGGAGAAAAACAAGTAAATCAAAAATACCTAATATCTCAAGTAGAAGGTGACCAGATTTCTCTGA
AAAATCTTCCTGAAATAACGAATATTTCTGAAGTCAAAAAGATATATAAAGTGTCTTCGCAAGAAGAAAAGATTGGGACA
TTATTGGGTGGTATCATTAGTAGAATGTCCACAAAAGATGTTTTATAA
ATGCAGTTAACATATCAGCTGGACTTATTTCCTGAATGCACAGTGACTCTTCTCTTATTTAAAGATGTAAAAAATGCTGG
AGACTTGAGAAAAAAGGCCATGGAAGGCACCATTGATGGTGCATTGATAAATCCTTCAGTGATTGTTGATCCTTTTCAGA
TACTTGTGGCAGCAAATAAAGCAGTTCACCTCTACAAACTGGGAAAAATGAAGACGAGAACTCTATCTACTGAAATTATT
TTCAACCTTTCCCCAAACAACAATATTTCAGAGGCTTTGAAAAAATTTGGTATCTCAGCAGATAATACTTCAATTTTAAT
TGTTTACGTTGAAGAGGGAGAAAAACAAGTAAATCAAAAATACCTAATATCTCAAGTAGAAGGTGACCAGATTTCTCTGA
AAAATCTTCCTGAAATAACGAATATTTCTGAAGTCAAAAAGATATATAAAGTGTCTTCGCAAGAAGAAAAGATTGGGACA
TTATTGGGTGGTATCATTAGTAGAATGTCCACAAAAGATGTTTTATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012021 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004162 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000144034 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009062 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000030805 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016950 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000300 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016251 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000032893 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012292 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000012419 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014584 | ortholog_one2many | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000007934 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_453 | 76.35 | 84.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_918 | 61.94 | 75.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_919 | 60.50 | 66.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_1613 | 91.11 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000016406 retrocopies