Parental gene:

TPRKB, ENSVPAG00000007934

Aliases:None
Description:TP53RK binding protein [Source:HGNC Symbol;Acc:24259]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_1813:1955..16305(-)


>ENSVPAG00000007934
ATGCAGCTAACGCATCAGCTGGACCTATTTCCTGAATACAGAGTGACCCTTCTGTTATTTAAAGATGTAAAAAATGCTGG
AGACTTGAGAAAAAAGGCCATGGAAAGTGCCATTGATGGCTCATTAATAAACCCTACAGTGATTGTGGATCCATTTCAGA
TACTTGTGGCAGCAAACAAAGCAGTTCACCTCTACAAACTGGGAAAAATGAAGACAAGAACTCTATCTACTGAAATTATT
TTCAATCTTTCCCCAACTAACAATATTTCAGAGGCTCTGAAGAAATTTGGCATCTCGGCAAATGACACTTCAATTCTAAT
CACTTATATTGAAGAGGGAGAAAAACAAATAAATCAAGAAGACCTAGTATCTCAGGTGGAAGGTCATCAAGTTTCTCTGG
AAAATCTCCCTGAAATAACAAATATTACAGAAGTGAAAAAGATATATAAACTGTCTTCACAAGAAGAAAGTATTGGGACA
TTACTGGATGGTATCATTTGTAGAATGTCAACAAAAGATGTTTTATGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012021 ortholog_one2many 1 retrogene
retro_chof_35,
Callithrix jacchus ENSCJAG00000004162 ortholog_one2one 3 retrogenes
retro_cjac_1999, retro_cjac_2867, retro_cjac_3065,
Homo sapiens ENSG00000144034 ortholog_one2one 1 retrogene
retro_hsap_552,
Gorilla gorilla ENSGGOG00000009062 ortholog_one2one 1 retrogene
retro_ggor_501,
Macaca mulatta ENSMMUG00000030805 ortholog_one2many 1 retrogene
retro_mmul_1571,
Monodelphis domestica ENSMODG00000016950 ortholog_one2one 2 retrogenes
retro_mdom_1264, retro_mdom_465,
Nomascus leucogenys ENSNLEG00000000300 ortholog_one2one 2 retrogenes
retro_nleu_2021, retro_nleu_957,
Oryctolagus cuniculus ENSOCUG00000016251 ortholog_one2one 2 retrogenes
retro_ocun_519, retro_ocun_769,
Otolemur garnettii ENSOGAG00000032893 ortholog_one2one 2 retrogenes
retro_ogar_523, retro_ogar_849,
Pongo abelii ENSPPYG00000012292 ortholog_one2one 1 retrogene
retro_pabe_509,
Pteropus vampyrus ENSPVAG00000012419 ortholog_one2one 1 retrogene
retro_pvam_75,
Ictidomys tridecemlineatus ENSSTOG00000016406 ortholog_one2one 4 retrogenes
retro_itri_1613, retro_itri_453, retro_itri_918, retro_itri_919,
Tupaia belangeri ENSTBEG00000014584 ortholog_one2many 2 retrogenes
retro_tbel_33, retro_tbel_3630,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_149 94.35 100.00
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2. retro_vpac_192 52.94 75.43
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Download FASTA sequences of all ENSVPAG00000007934 retrocopies