Parental gene:

UBE2E1, ENSSTOG00000025799

Aliases:None
Description:ubiquitin-conjugating enzyme E2E 1 [Source:HGNC Symbol;Acc:12477]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393283.1:15554761..15556848(+)


>ENSSTOG00000025799
AGTGCTGGTCCCAAAGGTGATAACATCTATGAATGGAGATCAACCATTCTAGGGCCTCCAGGATCTGTGTATGAAGGTGG
TGTATTTTTCCTCGATATCACTTTTACACCAGAATATCCCTTCAAGCCTCCAAAGGTTACATTTCGAACAAGAATCTATC
ACTGTAATATTAATAGTCAAGGAGTTATTTGCTTGGATATATTGAAAGATAATTGGAGTCCAGCACTAACTATTTCTAAA
GTTCTCCTTTCTATCTGCTCACTTCTTACAGACTGTAATCCTGCTGACCCTTTGGTGGGAAGTATTGCCACTCAGTATAT
GACCAACAGAGCAGAACATGACAGAATGGCCAGACAGTGGACCAAGAGATACGCTACATAA

Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Cavia porcellus ENSCPOG00000002251 possible_ortholog 2 retrogenes
retro_cpor_1036, retro_cpor_52,
Dipodomys ordii ENSDORG00000015441 ortholog_one2one 1 retrogene
retro_dord_785,
Macropus eugenii ENSMEUG00000014517 ortholog_one2one 1 retrogene
retro_meug_2089,
Mus musculus ENSMUSG00000021774 ortholog_one2one 3 retrogenes
retro_mmus_2493, retro_mmus_2600, retro_mmus_537,
Pteropus vampyrus ENSPVAG00000001773 ortholog_one2one 1 retrogene
retro_pvam_1451,
Rattus norvegicus ENSRNOG00000008794 ortholog_one2one 3 retrogenes
retro_rnor_1632, retro_rnor_2291, retro_rnor_2343,
Sarcophilus harrisii ENSSHAG00000001416 ortholog_one2one 1 retrogene
retro_shar_712,
Ictidomys tridecemlineatus ENSSTOG00000013481 other_paralog 6 retrogenes
retro_itri_1222, retro_itri_1474, retro_itri_1628, retro_itri_463, retro_itri_672, retro_itri_998,
Ictidomys tridecemlineatus ENSSTOG00000016293 other_paralog 2 retrogenes
retro_itri_1528, retro_itri_655,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_645 92.06 100.00
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2. retro_itri_1371 93.65 100.00
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Download FASTA sequences of all ENSSTOG00000025799 retrocopies