Parental gene:

ENSTBEG00000013044

Aliases:None
Description:None
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2587:9205..54760(-)


>ENSTBEG00000013044
ATGGCGGGACACCCGGCTTCAGAGTTCGCCTTCTCACCCCCGCCAGGAGGTGGAGGGGATGGGCCAGGGGGGCCGGAGCC
GGGCTGGATTGACCCTCGGACCTGGCTAAGCTTCCAAGGCCCTCCTGGTGGCCCAGGAATCGGGCCGGGGGTTGGGCCAG
GCTCTGAGATGTGGGGGATTCCTCCATGCCCCCCGCCCTATGAGTTCTGTGGAGGGATGGCTTACTGTGGGCCTTCAGTC
GGAGTGGGGCTGGTGCCCTCGAACAACCTGGAGATGTCCCAGCTTGAAGTCGAGGTGGGAGCAGGGGAGGAGAGAAACTC
GGAGGAGGCCTCCCCAGAGTGTGCTGCACCTCTTGCTGACTTGAAGCTGGAGGAGAGCCTTGAGCAAAACCCCGAGAAGT
CGCAGGACATCGAAGCGCTGCAGAAAGAACTGGAGCAGTTTGCCAAGCTCTTGAAGCAGAAGAGGATCACCCTAGGATAC
ACCCAGGCTGATGTGGGGCTCACCCTGGGGGTTCTCTTTGGGAAGGTGTTCAGCCAGACGACCATCTGCCGTTTCGAAGC
GCTGCAGCTCAGTTTCAAGAACATGTGCAAGCTTCGGCCTCTGCTGCAGAAGTGGGTGGAGGAAGCCGACAACAACGAAA
ATCTTCAGGAGATATGCAAAGCGGAGACCCTAGTGCAGGCCCGAAAGAGAAAGCGGACCAGTATCGAGAACCGCGTGCGG
GGCAACTTGGAGAATATGTTTCTGCAGTGCCCGAAGCCCACGCTGCAGCAGATCGGCCACATCGCCCAGCAGCTCGGGTT
GGAGAAGGACGTGGTCCGAGTGTGGTTCTGTAACCGCCGCCAGAAGGGCAAGAGGTCGAGCAGCGACTACGTGCAGCGAG
AAGATTTCGAGGCTGCTGGCTCTCCTTTCTCAGGGGGACCAGTACCCTTTCCTCTCGCCCCAGGGCCCCATTTTGGTACC
CCAGGCTACGGGAGCCCTCATTTTACCTCGCTGTACTCCTCGGTCCCTTTCCCTGAGGGGGAAGCCTTTCCCCCGGTCTC
TGTCACCACTCTGGGCTCTCCCATGCATTCCAATTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010377 ortholog_one2many 3 retrogenes
Bos taurus ENSBTAG00000021111 ortholog_one2many 2 retrogenes
Canis familiaris ENSCAFG00000000485 ortholog_one2one 1 retrogene
Callithrix jacchus ENSCJAG00000019789 ortholog_one2many 1 retrogene
Dipodomys ordii ENSDORG00000009549 ortholog_one2many 1 retrogene
Equus caballus ENSECAG00000008967 ortholog_one2one 1 retrogene
Erinaceus europaeus ENSEEUG00000015357 ortholog_one2one 2 retrogenes
Felis catus ENSFCAG00000001078 ortholog_one2one 3 retrogenes
Gorilla gorilla ENSGGOG00000027662 ortholog_one2one 3 retrogenes
Macropus eugenii ENSMEUG00000013221 ortholog_one2one 3 retrogenes
Microcebus murinus ENSMICG00000001511 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000011028 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000001202 ortholog_one2one 2 retrogenes
Mus musculus ENSMUSG00000024406 ortholog_one2one 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000017160 ortholog_one2many 3 retrogenes
Otolemur garnettii ENSOGAG00000000621 ortholog_one2one 3 retrogenes
Ochotona princeps ENSOPRG00000003926 ortholog_one2one 2 retrogenes
Pongo abelii ENSPPYG00000017210 ortholog_one2one 3 retrogenes
Pan troglodytes ENSPTRG00000017953 ortholog_one2one 5 retrogenes
Pteropus vampyrus ENSPVAG00000007334 ortholog_one2one 2 retrogenes
Rattus norvegicus ENSRNOG00000046487 ortholog_one2one 4 retrogenes
Sus scrofa ENSSSCG00000001393 ortholog_one2one 2 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000026103 ortholog_one2many 3 retrogenes
Tarsius syrichta ENSTSYG00000007340 ortholog_one2one 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_3628 52.50 85.75
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2. retro_tbel_3718 65.95 75.98
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3. retro_tbel_3779 79.29 53.63
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4. retro_tbel_4614 74.18 58.10
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Download FASTA sequences of all ENSTBEG00000013044 retrocopies