Parental gene: | ONIVA02G02120 |
| Aliases: | None |
| Description: | None |
| Organism: | Indian wild rice (Oryza nivara) |
| Coordinates: | 2:1227482..1232549(-) |
>ONIVA02G02120
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCGACC
GCCGCGCTCTGCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTC
CAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGATTAA
CATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAAC
CAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAAACT
TGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACT
TTGACATTCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
CTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCTAGC
AATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGG
ATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTATGCA
TGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAA
CACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAATCT
GGCGTGTTCATGATGATTGCTCATTCACTGGTGAAGTCATAGGATCACAGCAGACCAAGGCATGA
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCGACC
GCCGCGCTCTGCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTC
CAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGATTAA
CATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAAC
CAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAAACT
TGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACT
TTGACATTCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
CTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCTAGC
AATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGG
ATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTATGCA
TGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAA
CACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAATCT
GGCGTGTTCATGATGATTGCTCATTCACTGGTGAAGTCATAGGATCACAGCAGACCAAGGCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Leersia perrieri | LPERR02G02000 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB02G12100 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART02G02200 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM02G02060 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G01640 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G02210 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0127700 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oniv_9 | 84.42 | 78.96 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ONIVA02G02120 retrocopies