Parental gene: | OGLUM02G02060 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza glumaepatula |
| Coordinates: | 2:1406061..1410964(-) |
>OGLUM02G02060
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCG
GCCGCCGCGCTCTGCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGATTACCACCATACG
CTCCAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGG
TTGCGTATCTTCTCAGGCACTGCCAATCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGAT
TAACATAAAAAGGTTTGCTGATGGCGAAATTTATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGC
AACCAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAG
AATATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAA
ACTTGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGAT
ACTTTGACATCCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGAT
GACCTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCT
AGCAATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGA
TGGATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTAT
GCATGCTGTACACATGCTGTTTTTAGCCCGCCTGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCAC
AAACACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAA
TCTGGCGTGTTCATGATGATTGCTCATGGAACTCGAATGCGACTGCCAACTGA
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCG
GCCGCCGCGCTCTGCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGATTACCACCATACG
CTCCAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGG
TTGCGTATCTTCTCAGGCACTGCCAATCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGAT
TAACATAAAAAGGTTTGCTGATGGCGAAATTTATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGC
AACCAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAG
AATATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAA
ACTTGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGAT
ACTTTGACATCCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGAT
GACCTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCT
AGCAATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGA
TGGATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTAT
GCATGCTGTACACATGCTGTTTTTAGCCCGCCTGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCAC
AAACACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAA
TCTGGCGTGTTCATGATGATTGCTCATGGAACTCGAATGCGACTGCCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI3G02680 | ortholog_one2one | 1 retrogene | |
| Leersia perrieri | LPERR02G02000 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB02G12100 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART02G02200 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA02G02120 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G01640 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G02210 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0127700 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_6AS_88F0CBEC0 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oglu_34 | 83.87 | 78.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OGLUM02G02060 retrocopies