Parental gene:

OBART02G02200

Aliases:None
Description:None
Organism:Oryza barthii
Coordinates:2:1287583..1290854(-)


>OBART02G02200
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCG
GCCGCCGCGCTCTGCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGATTACCACCATACG
CTCCAGTGTCTAACAGATCGTTGTTAAGTCCTGTGATGCTGCCGATTATCCAGGATGCGAATATTAAGAATGATACAAGG
TTGCGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGAT
TAACATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGC
AACCAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAG
AATATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAA
ACTTGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGAT
ACTTTGACATCCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGAT
GACCTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCT
AGCAATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGA
TGGATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTAT
GCATGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCAC
AAACACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAA
TCTGGCGTGTTCATGATGATTGCTCAGTGAGTACTAAGTGGCAACAACTTGCCAGTTATCACGCAAACTCTGCTCTTTTA
TGTGCTAGATTTGGTGCTTCCAATTAA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI3G02680 ortholog_one2one 1 retrogene
retro_bdis_29,
Leersia perrieri LPERR02G02000 ortholog_one2one 1 retrogene
retro_lper_21,
Oryza brachyantha OB02G12100 ortholog_one2one 1 retrogene
retro_obra_24,
Oryza glumaepatula OGLUM02G02060 ortholog_one2one 1 retrogene
retro_oglu_34,
Oryza nivara ONIVA02G02120 ortholog_one2one 1 retrogene
retro_oniv_9,
Oryza punctata OPUNC02G01640 ortholog_one2one 1 retrogene
retro_opun_20,
Oryza rufipogon ORUFI02G02210 ortholog_one2one 1 retrogene
retro_oruf_33,
Oryza sativa japonica OS02G0127700 ortholog_one2one 1 retrogene
retro_osat_35,
Triticum aestivum Traes_6AS_88F0CBEC0 ortholog_one2one 1 retrogene
retro_taes_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_obar_2 83.71 75.74
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Download FASTA sequences of all OBART02G02200 retrocopies