Parental gene: | ORUFI02G02210 |
| Aliases: | None |
| Description: | None |
| Organism: | Brownbeard rice (Oryza rufipogon) |
| Coordinates: | 2:1326960..1330158(-) |
>ORUFI02G02210
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCGACC
GCCGCGCTCTTCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTC
CAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGATTAA
CATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAAC
CAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAAACT
TGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACT
TTGACATCCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
CTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCTAGC
AATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGG
ATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTATGCA
TGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAA
CACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAATCT
GGCGTGTTCATGATGATTGCTCAGTGAGTACTAAGTAG
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCGACC
GCCGCGCTCTTCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTC
CAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGATTAA
CATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAAC
CAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAAACT
TGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACT
TTGACATCCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
CTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCTAGC
AATTGTTGATAAAAGAAGGCATGGACACAATGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTGTTATGATGG
ATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAAGTCTATGCA
TGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAATCATCACAAA
CACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCGAGACAATCT
GGCGTGTTCATGATGATTGCTCAGTGAGTACTAAGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Leersia perrieri | LPERR02G02000 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB02G12100 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART02G02200 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM02G02060 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA02G02120 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G01640 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0127700 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oruf_33 | 83.87 | 79.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORUFI02G02210 retrocopies