Parental gene:

OS02G0127700

Aliases:None
Description:Ribose-phosphate pyrophosphokinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6Z2L5]
Organism:Rice subsp. japonica (Oryza sativa japonica)
Coordinates:2:1437440..1441181(-)


>OS02G0127700
ATGCCGCTCTCCTACTCAGCCGCCGCCGCCGCCGCGCCGTCCCCTCTCGCCGCGCGCAGCCGCGGCCTCCTCCGCCGACC
GCCGCGCTCTTCCCCCGTCGTCGTGAGGTGCAAGAAGATTGATCAACTGAGGGCAGTCAATGGAATACCACCATACGCTC
CAGTGTCTAACAGATCGTTGTTAAGTCCTGTGACGCTGCCGATTATCCGGGATGCGAATATTAAGAATGATACAAGGTTG
CGTATCTTCTCAGGGACTGCCAACCCTTCTCTTTCCCAGGAAATAGCAAGTTACTTGGGCTTAGAACTTGGGAAGATTAA
CATAAAAAGGTTTGCTGATGGCGAAATATATGTTCAGTTACAAGAAAGCGTAAGGGGATGCGATGTTTTCCTTGTGCAAC
CAACGTGCCCTCCTGCAAATGAGAATCTTATGGAACTTCTGATCATGATTGATGCCTGTAGGAGAGCATCTGCTAAGAAT
ATTACTGCAGTCATCCCTTATTTTGGTTATGCCAGAGCTGACAGGAAGTCTCAAGGCCGTGAATCTATAGCTGCAAAACT
TGTAGCTAATATGATTACAGAAGCTGGTGCGAACCGTGTCCTTGTATGTGATCTTCATTCCAGTCAAGCCATGGGATACT
TTGACATCCCAGTAGATCATGTTTATGGTCAGCCTGTGATTCTTGATTACCTCGCCAGCAAGACAATATGTTCAGATGAC
CTGGTGGTGGTGTCTCCGGATGTTGGAGGTGTTGCCAGGGCACGTGCTTTTGCCAAAAAGCTATCAGATGCACCTCTAGC
AATTGTTGATAAAAGAAGGCATGGACACAATGTTGCCGAGGTAATGAATCTTATTGGAGATGTTAGAGGAAAAGTGGCTG
TTATGATGGATGATATGATTGATACAGCTGGAACTATTGCCAAAGGAGCTGAGCTGCTGCATCAAGAAGGAGCAAGAGAA
GTCTATGCATGCTGTACACATGCTGTTTTTAGCCCGCCCGCCATTGAAAGGTTATCAAGTGGTTTGTTTCAAGAAGTAAT
CATCACAAACACTATACCTCTCAAGGAGGACAAGAGTTTCCCGCAGCTGACTATCCTTTCAGTTGCTAACCTTTTAGGCG
AGACAATCTGGCGTGTTCATGATGATTGCTCAGTTGGTCATGAGCCATACTCTAGCTTGGACATTGACTGA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI3G02680 ortholog_one2one 1 retrogene
retro_bdis_29,
Leersia perrieri LPERR02G02000 ortholog_one2one 1 retrogene
retro_lper_21,
Oryza brachyantha OB02G12100 ortholog_one2one 1 retrogene
retro_obra_24,
Oryza barthii OBART02G02200 ortholog_one2one 1 retrogene
retro_obar_2,
Oryza glumaepatula OGLUM02G02060 ortholog_one2one 1 retrogene
retro_oglu_34,
Oryza nivara ONIVA02G02120 ortholog_one2one 1 retrogene
retro_oniv_9,
Oryza punctata OPUNC02G01640 ortholog_one2one 1 retrogene
retro_opun_20,
Oryza rufipogon ORUFI02G02210 ortholog_one2one 1 retrogene
retro_oruf_33,
Triticum aestivum Traes_6AS_88F0CBEC0 ortholog_one2one 1 retrogene
retro_taes_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_osat_35 84.42 77.53
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Download FASTA sequences of all OS02G0127700 retrocopies