RetrogeneDB ID: | retro_amel_575 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192508.1:555230..555563(+) | ||
Located in intron of: | ENSAMEG00000003081 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | EIF1 | ||
Ensembl ID: | ENSAMEG00000005620 | ||
Aliases: | None | ||
Description: | eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] |
Percent Identity: | 79.31 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MSAIQNLHSFDPFADASKGDDLLPAGTEDYIHIRI-QQRNGRKTLTTVQGIADDYDK-KKL-VKAFKKKF |
MSAI..LHSF..FADASKGDDLLPAGTEDY.HIRI.QQR..RKT..T.QGIADDYDK.KKL..KAFKK.F | |
Retrocopy | MSAIWTLHSFNVFADASKGDDLLPAGTEDYTHIRI<QQRKSRKTFNTIQGIADDYDK<KKL<MKAFKKNF |
Parental | ACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF |
..NGTVIEHPEYGEVIQLQGD..KNICQF..EIGLA.D.QLKV.GF | |
Retrocopy | VYNGTVIEHPEYGEVIQLQGDHCKNICQFR-EIGLAEDNQLKVQGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |