RetrogeneDB ID: | retro_chof_1160 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_214751:3034..3268(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HSPE1 | ||
Ensembl ID: | ENSCHOG00000007417 | ||
Aliases: | None | ||
Description: | heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] |
Percent Identity: | 83.54 % |
Parental protein coverage: | 77.45 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | ETVTKGGIMLPEKSQGKVLQATVLAVGSGAKGKGGQIEPVSVKVGDKVLLPEYGGTKVVLEEKEYFLFRD |
ETVTKGGIMLPEKSQGKVL.ATV.A.GSG.K.KGG.IEPVS.KVGDKV.LPEYGGTKVVL..KEYFLFRD | |
Retrocopy | ETVTKGGIMLPEKSQGKVL*ATVVAIGSGSKEKGGAIEPVSMKVGDKV-LPEYGGTKVVLDDKEYFLFRD |
Parental | SDILGKYIE |
.DILGKY.. | |
Retrocopy | GDILGKYVD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |