RetrogeneDB - Parental gene ENSFCAG00000014455 details

                            
>ENSFCAG00000014455
CAGGCAGGACAAGCGTTTAGGAAGTTTCTTCCTCTCTTTGACCGAGTTTTAGTTGAAAGGAGTGCAGCCGAAACTGTAAC

CAAAGGAGGCATTATGCTTCCAGAAAAATCGCAAGGAAAAGTTTTGCAAGCAACAGTAGTAGCTGTTGGATCGGGCTCTA

AAGGAAAGGGTGGAGAGATCCAACCAGTCAGTGTGAAAGTTGGAGATAAAGTTCTTCTCCCAGAATATGGAGGCACCAAA

GTAGTTCTAGATGACAAGGATTATTTCTTATTTAGAGATGGTGACATTCTCGGAAAGTATGTAGACTGA

Library	Parental gene expression (RPM)
SRP017611_brain	25 .94 RPM
SRP017611_kidney	160 .87 RPM
SRP017611_liver	105 .54 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000013769	possible_ortholog	18 retrogenes	retro_amel_1027, retro_amel_1083, retro_amel_1084, retro_amel_1100, retro_amel_133, retro_amel_1504, retro_amel_1513, retro_amel_1623, retro_amel_1699, retro_amel_1819, retro_amel_199, retro_amel_23, retro_amel_269, retro_amel_310, retro_amel_329, retro_amel_491, retro_amel_506, retro_amel_922,
Bos taurus	ENSBTAG00000012589	ortholog_one2one	4 retrogenes	retro_btau_1118, retro_btau_624, retro_btau_760, retro_btau_801,
Canis familiaris	ENSCAFG00000010890	ortholog_one2one	4 retrogenes	retro_cfam_1768, retro_cfam_1883, retro_cfam_208, retro_cfam_556,
Choloepus hoffmanni	ENSCHOG00000007417	possible_ortholog	17 retrogenes	retro_chof_1048, retro_chof_1160, retro_chof_143, retro_chof_1476, retro_chof_1561, retro_chof_1755, retro_chof_1880, retro_chof_2052, retro_chof_2053, retro_chof_226, retro_chof_303, retro_chof_414, retro_chof_420, retro_chof_86, retro_chof_907, retro_chof_91, retro_chof_940,
Dasypus novemcinctus	ENSDNOG00000013246	ortholog_one2many	27 retrogenes	retro_dnov_1088, retro_dnov_1117, retro_dnov_1214, retro_dnov_1375, retro_dnov_1391, retro_dnov_1405, retro_dnov_1412, retro_dnov_1428, retro_dnov_1445, retro_dnov_1546, retro_dnov_1647, retro_dnov_1652, retro_dnov_1686, retro_dnov_1821, retro_dnov_2176, retro_dnov_2291, retro_dnov_2413, retro_dnov_2569, retro_dnov_2625, retro_dnov_2652, retro_dnov_418, retro_dnov_481, retro_dnov_483, retro_dnov_490, retro_dnov_524, retro_dnov_554, retro_dnov_966,
Equus caballus	ENSECAG00000026874	ortholog_one2one	1 retrogene	retro_ecab_716,
Erinaceus europaeus	ENSEEUG00000005040	possible_ortholog	6 retrogenes	retro_eeur_132, retro_eeur_278, retro_eeur_474, retro_eeur_611, retro_eeur_657, retro_eeur_698,
Loxodonta africana	ENSLAFG00000000057	ortholog_one2one	1 retrogene	retro_lafr_69,
Myotis lucifugus	ENSMLUG00000000878	ortholog_one2one	4 retrogenes	retro_mluc_1724, retro_mluc_1972, retro_mluc_1979, retro_mluc_2086,
Mus musculus	ENSMUSG00000073676	possible_ortholog	11 retrogenes	retro_mmus_1005, retro_mmus_1719, retro_mmus_1750, retro_mmus_1934, retro_mmus_2483, retro_mmus_2485, retro_mmus_301, retro_mmus_3077, retro_mmus_386, retro_mmus_872, retro_mmus_877,
Oryctolagus cuniculus	ENSOCUG00000010360	ortholog_one2one	1 retrogene	retro_ocun_127,
Otolemur garnettii	ENSOGAG00000034434	ortholog_one2many	24 retrogenes	retro_ogar_1018, retro_ogar_1441, retro_ogar_1512, retro_ogar_1690, retro_ogar_1744, retro_ogar_1899, retro_ogar_191, retro_ogar_1921, retro_ogar_200, retro_ogar_2030, retro_ogar_2129, retro_ogar_2310, retro_ogar_235, retro_ogar_2439, retro_ogar_2636, retro_ogar_2928, retro_ogar_3088, retro_ogar_3350, retro_ogar_3419, retro_ogar_389, retro_ogar_777, retro_ogar_824, retro_ogar_829, retro_ogar_834,
Rattus norvegicus	ENSRNOG00000014868	possible_ortholog	6 retrogenes	retro_rnor_1094, retro_rnor_1320, retro_rnor_1334, retro_rnor_2245, retro_rnor_2296, retro_rnor_984,
Vicugna pacos	ENSVPAG00000005805	ortholog_one2one	8 retrogenes	retro_vpac_173, retro_vpac_209, retro_vpac_292, retro_vpac_299, retro_vpac_329, retro_vpac_410, retro_vpac_443, retro_vpac_46,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_fcat_97	83.72	84.31	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_fcat_114	90.00	98.04	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_fcat_457	75.25	98.04	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_fcat_681	75.25	99.02	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_fcat_794	64.71	80.39	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_fcat_1174	77.63	73.53	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_fcat_1406	98.04	99.02	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_fcat_1686	88.57	99.02	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_fcat_1723	86.36	85.29	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSFCAG00000014455 retrocopies

Parental gene:	ENSFCAG00000014455
Aliases:	None
Description:	None
Organism:	*Cat (Felis catus)*
Coordinates:	C1:183626988..183628439(+)

Parental gene:

ENSFCAG00000014455