RetrogeneDB ID: | retro_chof_1476 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_302179:169..431(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HSPE1 | ||
Ensembl ID: | ENSCHOG00000007417 | ||
Aliases: | None | ||
Description: | heat shock 10kDa protein 1 (chaperonin 10) [Source:HGNC Symbol;Acc:5269] |
Percent Identity: | 76.67 % |
Parental protein coverage: | 85.29 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | VLVERSAAETVTKGGIMLPEKSQGKVLQATVLAVGS-GAKGKGGQIEPVSV-KVGDKVLLPEYGGTKVVL |
VLVERSA..T..KG.IMLPEK.QGKVLQATV.AVGS.G.KGKGG..EPV.V.KVGDKVLLPEYGGTKVVL | |
Retrocopy | VLVERSATKTIIKGSIMLPEKCQGKVLQATVVAVGS>GSKGKGGDTEPVRV>KVGDKVLLPEYGGTKVVL |
Parental | EEKE-YFLFRDSDILGKYIE |
..K..YFLFRD.D.L.KY.E | |
Retrocopy | DDKD<YFLFRDGDNLRKYGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |