RetrogeneDB ID: | retro_chof_1302 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_2553:22234..22876(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | AURKA | ||
Ensembl ID: | ENSCHOG00000005976 | ||
Aliases: | None | ||
Description: | aurora kinase A [Source:HGNC Symbol;Acc:11393] |
Percent Identity: | 95.81 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | HPNILRLYGYFHDATRVYLILEYAPLGAVYRELQKLSKFDEQRTATYITELADALSYCHSKKVIHRDIKP |
HPNILRLYGYFHDATRVYLILEYAPLGAVYRELQKLSKFDEQRT.T.ITELADALSYCHSK.VIHRDIKP | |
Retrocopy | HPNILRLYGYFHDATRVYLILEYAPLGAVYRELQKLSKFDEQRT-TCITELADALSYCHSKEVIHRDIKP |
Parental | ENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF |
ENLLL.SAGELKIADFGWSVHAPSSRRTTLCGTL.YLPPEMIEGRMHDEKVDLWSLGVLCYEFLV.KPPF | |
Retrocopy | ENLLLWSAGELKIADFGWSVHAPSSRRTTLCGTLNYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVRKPPF |
Parental | EANTYQETYNRISRVEFT-PDFVTEGARDLISRLLKHNPSQRPTLKEVLEHPWITANSSKPPSSQKNKES |
EANTYQETYNRISRVEFT.PDFVTEGARDLISRLLKHNPSQRPTLKEVLEHPWITANSSKPPSSQKNKES | |
Retrocopy | EANTYQETYNRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPTLKEVLEHPWITANSSKPPSSQKNKES |
Parental | TSRPS |
TS..S | |
Retrocopy | TSKLS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |